Gene annotation
Transcriptome id Sobic.005G021900.1
Synonym Sb05g001850
Functional annotation expressed protein
UniProt C5Y3Z4
Pfam -
Panther DB PTHR33870 PTHR33870:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17910 : -
RAP-DB (Rice) LOC_Os12g03410.1 : expressed protein
MaizeGDB (Corn) Zm00025a013133
Brachypodium -
Barley HORVU0Hr1G010760.2 , HORVU0Hr1G010760.1 , HORVU0Hr1G010760.6 , HORVU0Hr1G010760.4 , HORVU0Hr1G010760.8
Wheat TraesCS5D02G151300 , TraesCS5A02G141100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
2 Sobic.005G091000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
3 Sobic.008G083500 expressed protein -
4 Sobic.003G420300 zinc finger protein, putative, expressed -
5 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
6 Sobic.002G074000 expressed protein -
7 Sobic.006G105600 "domain confirmed by Pfam database, expression is supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA treatment"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
8 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
9 Sobic.003G283600 HVA22, putative, expressed -
10 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
11 Sobic.003G423600 expressed protein K06228: fused
12 Sobic.001G285200 protein transport protein-related, putative, expressed -
13 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
14 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
15 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
16 Sobic.010G151700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@extra-large G-protein-related, putative, expressed -
17 Sobic.010G250800 DNA binding protein, putative, expressed -
18 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
19 Sobic.008G192700 ATMAP70 protein, putative, expressed -
20 Sobic.001G416000 kinesin-related protein, putative, expressed K10398: KIF11, kinesin family member 11


Gene co-expression network
sample Sobic005G021900 Sobic005G021900 Sobic006G272500 Sobic006G272500 Sobic005G021900--Sobic006G272500 Sobic005G091000 Sobic005G091000 Sobic005G021900--Sobic005G091000 Sobic008G083500 Sobic008G083500 Sobic005G021900--Sobic008G083500 Sobic003G420300 Sobic003G420300 Sobic005G021900--Sobic003G420300 Sobic007G166800 Sobic007G166800 Sobic005G021900--Sobic007G166800 Sobic002G074000 Sobic002G074000 Sobic005G021900--Sobic002G074000 Sobic006G105600 Sobic006G105600 Sobic005G021900--Sobic006G105600 Sobic006G254500 Sobic006G254500 Sobic005G021900--Sobic006G254500 Sobic003G283600 Sobic003G283600 Sobic005G021900--Sobic003G283600 Sobic009G124800 Sobic009G124800 Sobic006G272500--Sobic009G124800 Sobic001G285200 Sobic001G285200 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic002G370400 Sobic002G370400 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic002G032500 Sobic002G032500 Sobic005G091000--Sobic002G032500 Sobic005G091000--Sobic006G105600 Sobic001G267100 Sobic001G267100 Sobic005G091000--Sobic001G267100 Sobic003G309400 Sobic003G309400 Sobic005G091000--Sobic003G309400 Sobic003G089300 Sobic003G089300 Sobic005G091000--Sobic003G089300 Sobic003G338200 Sobic003G338200 Sobic005G091000--Sobic003G338200 Sobic001G381100 Sobic001G381100 Sobic005G091000--Sobic001G381100 Sobic002G224200 Sobic002G224200 Sobic005G091000--Sobic002G224200 Sobic006G074900 Sobic006G074900 Sobic005G091000--Sobic006G074900 Sobic002G296000 Sobic002G296000 Sobic008G083500--Sobic002G296000 Sobic008G083500--Sobic003G420300 Sobic010G024500 Sobic010G024500 Sobic008G083500--Sobic010G024500 Sobic008G083500--Sobic006G105600 Sobic001G304800 Sobic001G304800 Sobic008G083500--Sobic001G304800 Sobic009G101100 Sobic009G101100 Sobic008G083500--Sobic009G101100 Sobic002G286700 Sobic002G286700 Sobic008G083500--Sobic002G286700 Sobic003G292700 Sobic003G292700 Sobic008G083500--Sobic003G292700 Sobic001G054700 Sobic001G054700 Sobic008G083500--Sobic001G054700 Sobic003G420300--Sobic003G292700 Sobic003G226700 Sobic003G226700 Sobic003G420300--Sobic003G226700 Sobic003G420300--Sobic008G083500 Sobic010G067600 Sobic010G067600 Sobic003G420300--Sobic010G067600 Sobic003G289800 Sobic003G289800 Sobic003G420300--Sobic003G289800 Sobic004G315700 Sobic004G315700 Sobic003G420300--Sobic004G315700 Sobic002G320600 Sobic002G320600 Sobic003G420300--Sobic002G320600 Sobic007G084200 Sobic007G084200 Sobic003G420300--Sobic007G084200 Sobic009G052100 Sobic009G052100 Sobic003G420300--Sobic009G052100 Sobic001G487200 Sobic001G487200 Sobic007G166800--Sobic001G487200 Sobic010G129700 Sobic010G129700 Sobic007G166800--Sobic010G129700 Sobic007G166800--Sobic006G254500 Sobic007G166800--Sobic001G285200 Sobic006G218900 Sobic006G218900 Sobic007G166800--Sobic006G218900 Sobic007G166800--Sobic005G021900 Sobic001G231200 Sobic001G231200 Sobic007G166800--Sobic001G231200 Sobic007G166800--Sobic004G315700 Sobic001G540700 Sobic001G540700 Sobic007G166800--Sobic001G540700 Sobic003G307200 Sobic003G307200 Sobic002G074000--Sobic003G307200 Sobic002G417000 Sobic002G417000 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic004G267600 Sobic004G267600 Sobic002G074000--Sobic004G267600 Sobic001G493900 Sobic001G493900 Sobic002G074000--Sobic001G493900 Sobic001G008300 Sobic001G008300 Sobic002G074000--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic002G074000--Sobic009G202801 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600 Sobic006G105600--Sobic005G091000 Sobic006G105600--Sobic001G267100 Sobic006G124400 Sobic006G124400 Sobic006G105600--Sobic006G124400 Sobic006G105600--Sobic002G296000 Sobic009G137500 Sobic009G137500 Sobic006G105600--Sobic009G137500 Sobic002G394500 Sobic002G394500 Sobic006G105600--Sobic002G394500 Sobic004G233700 Sobic004G233700 Sobic006G105600--Sobic004G233700 Sobic006G105600--Sobic008G083500 Sobic006G105600--Sobic001G304800 Sobic006G267500 Sobic006G267500 Sobic006G254500--Sobic006G267500 Sobic009G212100 Sobic009G212100 Sobic006G254500--Sobic009G212100 Sobic006G254500--Sobic004G315700 Sobic002G393200 Sobic002G393200 Sobic006G254500--Sobic002G393200 Sobic006G254500--Sobic007G166800 Sobic006G254500--Sobic001G285200 Sobic003G077500 Sobic003G077500 Sobic006G254500--Sobic003G077500 Sobic006G254500--Sobic001G487200 Sobic009G206500 Sobic009G206500 Sobic006G254500--Sobic009G206500 Sobic001G290500 Sobic001G290500 Sobic003G283600--Sobic001G290500 Sobic003G345000 Sobic003G345000 Sobic003G283600--Sobic003G345000 Sobic001G468500 Sobic001G468500 Sobic003G283600--Sobic001G468500 Sobic010G003300 Sobic010G003300 Sobic003G283600--Sobic010G003300 Sobic006G142500 Sobic006G142500 Sobic003G283600--Sobic006G142500 Sobic003G283600--Sobic001G296100 Sobic001G369800 Sobic001G369800 Sobic003G283600--Sobic001G369800 Sobic003G283600--Sobic001G540700 Sobic010G086000 Sobic010G086000 Sobic003G283600--Sobic010G086000
Octagon: transcription factors


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