Gene annotation
Transcriptome id Sobic.001G285200.2
Synonym Sb01g028010
Functional annotation protein transport protein-related, putative, expressed
UniProt A0A120GUL3 , A0A1Z5S809
Pfam PF05701
Panther DB PTHR23160 PTHR23160:SF8
NCBI CDD KOG1003; Actin filament-coating protein tropomyosin
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65010 : Plant protein of unknown function (DUF827)
RAP-DB (Rice) LOC_Os05g02820.1 : protein transport protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a018072 , Zm00025a003524
Brachypodium KQK07803 , PNT71950
Barley HORVU1Hr1G010380.5 , HORVU1Hr1G010380.4 , HORVU1Hr1G010380.6 , HORVU1Hr1G010380.3 , HORVU1Hr1G010380.2 , HORVU1Hr1G010380.9 , HORVU1Hr1G010380.1 , HORVU5Hr1G021850.1 , HORVU5Hr1G021850.2 , HORVU1Hr1G010380.8 , HORVU3Hr1G055970.1 , HORVU5Hr1G021890.1
Wheat TraesCS1D02G053300 , TraesCS1D02G053300 , TraesCS1B02G068000 , TraesCS1A02G051300 , TraesCS1A02G051300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
2 Sobic.001G201000 protein transport protein-related, putative, expressed -
3 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
4 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
5 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
6 Sobic.008G192700 ATMAP70 protein, putative, expressed -
7 Sobic.003G338200 receptor-like protein kinase precursor, putative, expressed -
8 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
9 Sobic.009G175100 inactive receptor kinase At2g26730 precursor, putative, expressed -
10 Sobic.009G172700 expressed protein -
11 Sobic.003G031700 protein kinase family protein, putative, expressed -
12 Sobic.002G293700 ATXR, putative, expressed -
13 Sobic.002G074000 expressed protein -
14 Sobic.010G216600 expressed protein -
15 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
17 Sobic.003G300400 expressed protein -
18 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
19 Sobic.008G148500 expressed protein -
20 Sobic.008G039800 rhoGAP domain containing protein, expressed -


Gene co-expression network
sample Sobic001G285200 Sobic001G285200 Sobic002G419200 Sobic002G419200 Sobic001G285200--Sobic002G419200 Sobic001G201000 Sobic001G201000 Sobic001G285200--Sobic001G201000 Sobic006G272500 Sobic006G272500 Sobic001G285200--Sobic006G272500 Sobic005G055600 Sobic005G055600 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic010G211800 Sobic010G211800 Sobic001G285200--Sobic010G211800 Sobic009G175100 Sobic009G175100 Sobic001G285200--Sobic009G175100 Sobic003G300400 Sobic003G300400 Sobic002G419200--Sobic003G300400 Sobic002G419200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic002G419200--Sobic003G116100 Sobic003G309400 Sobic003G309400 Sobic002G419200--Sobic003G309400 Sobic002G419200--Sobic003G277200 Sobic002G419200--Sobic001G285200 Sobic002G032500 Sobic002G032500 Sobic002G419200--Sobic002G032500 Sobic004G248100 Sobic004G248100 Sobic002G419200--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic002G419200--Sobic003G339600 Sobic001G201000--Sobic001G285200 Sobic001G201000--Sobic005G055600 Sobic002G320600 Sobic002G320600 Sobic001G201000--Sobic002G320600 Sobic003G031700 Sobic003G031700 Sobic001G201000--Sobic003G031700 Sobic001G023500 Sobic001G023500 Sobic001G201000--Sobic001G023500 Sobic007G116800 Sobic007G116800 Sobic001G201000--Sobic007G116800 Sobic001G201000--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic001G201000--Sobic007G087800 Sobic001G207600 Sobic001G207600 Sobic001G201000--Sobic001G207600 Sobic009G124800 Sobic009G124800 Sobic006G272500--Sobic009G124800 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic002G370400 Sobic002G370400 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic004G328300 Sobic004G328300 Sobic005G055600--Sobic004G328300 Sobic005G055600--Sobic001G201000 Sobic005G055600--Sobic001G285200 Sobic002G074000 Sobic002G074000 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic009G202801 Sobic009G202801 Sobic005G055600--Sobic009G202801 Sobic005G055600--Sobic009G175100 Sobic005G055600--Sobic007G087800 Sobic005G055600--Sobic001G023500 Sobic003G277200--Sobic002G419200 Sobic003G277200--Sobic003G338200 Sobic003G277200--Sobic003G116100 Sobic008G039800 Sobic008G039800 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400 Sobic008G192700--Sobic001G285200 Sobic008G015200 Sobic008G015200 Sobic008G192700--Sobic008G015200 Sobic010G049300 Sobic010G049300 Sobic008G192700--Sobic010G049300 Sobic008G192700--Sobic002G074000 Sobic008G192700--Sobic008G148500 Sobic008G192700--Sobic006G272500 Sobic008G192700--Sobic002G419200 Sobic001G507200 Sobic001G507200 Sobic008G192700--Sobic001G507200 Sobic001G026800 Sobic001G026800 Sobic008G192700--Sobic001G026800 Sobic003G338200--Sobic002G032500 Sobic003G338200--Sobic002G419200 Sobic003G338200--Sobic003G309400 Sobic003G338200--Sobic004G248100 Sobic003G338200--Sobic001G345200 Sobic003G338200--Sobic003G116100 Sobic007G094200 Sobic007G094200 Sobic003G338200--Sobic007G094200 Sobic003G338200--Sobic003G277200 Sobic003G338200--Sobic003G300400 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic007G063100 Sobic007G063100 Sobic009G175100--Sobic007G063100 Sobic006G193100 Sobic006G193100 Sobic009G175100--Sobic006G193100 Sobic009G175100--Sobic005G055600 Sobic009G175100--Sobic001G026800 Sobic009G175100--Sobic007G116800 Sobic004G102200 Sobic004G102200 Sobic009G175100--Sobic004G102200 Sobic009G175100--Sobic004G328300 Sobic009G175100--Sobic001G285200 Sobic009G175100--Sobic003G031700
Octagon: transcription factors


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