Gene annotation
Transcriptome id Sobic.008G039800.1
Synonym Sb08g003430
Functional annotation rhoGAP domain containing protein, expressed
UniProt C5YS40
Pfam PF00786 PF00620
Panther DB PTHR23177 PTHR23177:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT5G22400 : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
RAP-DB (Rice) LOC_Os11g05540.1 : rhoGAP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029298 , Zm00025a053911 , Zm00025a028790 , Zm00025a009724 , Zm00025a023990
Brachypodium KQJ92205 , KQJ92169 , PNT64174 , PNT64173 , KQJ89405 , KQJ89404 , KQJ89407 , KQJ89406 , KQJ89403
Barley HORVU4Hr1G021830.2 , HORVU5Hr1G039560.2 , HORVU5Hr1G039560.3 , HORVU4Hr1G021830.1 , HORVU5Hr1G042400.1 , HORVU5Hr1G042400.3 , HORVU5Hr1G042400.2 , HORVU5Hr1G039560.1
Wheat TraesCS5B02G126700 , TraesCS5D02G135300 , TraesCS5A02G127700 , TraesCS5A02G127700 , TraesCS4A02G197900 , TraesCS4A02G197900 , TraesCS4B02G117600 , TraesCS4D02G115300
Populus -


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cDNA sequences
Sobic.008G039800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
2 Sobic.001G037400 expressed protein -
3 Sobic.009G242501 - -
4 Sobic.001G285200 protein transport protein-related, putative, expressed -
5 Sobic.010G216600 expressed protein -
6 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
9 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
10 Sobic.001G231200 expressed protein -
11 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
12 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
13 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
15 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
16 Sobic.006G245600 protein kinase domain containing protein, expressed -
17 Sobic.007G130900 expressed protein -
18 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
19 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
20 Sobic.001G382700 inactive receptor kinase At2g26730 precursor, putative, expressed -


Gene co-expression network
sample Sobic008G039800 Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic008G039800--Sobic003G277200 Sobic001G037400 Sobic001G037400 Sobic008G039800--Sobic001G037400 Sobic009G242501 Sobic009G242501 Sobic008G039800--Sobic009G242501 Sobic001G285200 Sobic001G285200 Sobic008G039800--Sobic001G285200 Sobic010G216600 Sobic010G216600 Sobic008G039800--Sobic010G216600 Sobic009G211800 Sobic009G211800 Sobic008G039800--Sobic009G211800 Sobic008G096200 Sobic008G096200 Sobic008G039800--Sobic008G096200 Sobic003G013000 Sobic003G013000 Sobic008G039800--Sobic003G013000 Sobic001G196000 Sobic001G196000 Sobic008G039800--Sobic001G196000 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic003G277200--Sobic008G039800 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic003G277200--Sobic001G037400 Sobic004G243800 Sobic004G243800 Sobic001G037400--Sobic004G243800 Sobic001G037400--Sobic008G039800 Sobic001G037400--Sobic003G277200 Sobic003G419600 Sobic003G419600 Sobic001G037400--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic001G037400--Sobic005G110600 Sobic004G288500 Sobic004G288500 Sobic001G037400--Sobic004G288500 Sobic001G037400--Sobic001G196000 Sobic003G006100 Sobic003G006100 Sobic001G037400--Sobic003G006100 Sobic001G037400--Sobic009G211800 Sobic003G420100 Sobic003G420100 Sobic009G242501--Sobic003G420100 Sobic009G021700 Sobic009G021700 Sobic009G242501--Sobic009G021700 Sobic009G242501--Sobic010G216600 Sobic004G170900 Sobic004G170900 Sobic009G242501--Sobic004G170900 Sobic009G242501--Sobic008G039800 Sobic007G208100 Sobic007G208100 Sobic009G242501--Sobic007G208100 Sobic009G242501--Sobic003G277200 Sobic004G233700 Sobic004G233700 Sobic009G242501--Sobic004G233700 Sobic009G242501--Sobic003G013000 Sobic001G285200--Sobic002G419200 Sobic001G201000 Sobic001G201000 Sobic001G285200--Sobic001G201000 Sobic006G272500 Sobic006G272500 Sobic001G285200--Sobic006G272500 Sobic005G055600 Sobic005G055600 Sobic001G285200--Sobic005G055600 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic001G285200--Sobic003G338200 Sobic010G211800 Sobic010G211800 Sobic001G285200--Sobic010G211800 Sobic009G175100 Sobic009G175100 Sobic001G285200--Sobic009G175100 Sobic010G216600--Sobic003G338200 Sobic010G216600--Sobic004G170900 Sobic007G225400 Sobic007G225400 Sobic010G216600--Sobic007G225400 Sobic010G111200 Sobic010G111200 Sobic010G216600--Sobic010G111200 Sobic010G216600--Sobic002G419200 Sobic010G216600--Sobic003G277200 Sobic002G016400 Sobic002G016400 Sobic010G216600--Sobic002G016400 Sobic010G216600--Sobic003G116100 Sobic001G382700 Sobic001G382700 Sobic010G216600--Sobic001G382700 Sobic009G211800--Sobic004G243800 Sobic009G211800--Sobic008G039800 Sobic009G211800--Sobic003G277200 Sobic009G211800--Sobic001G037400 Sobic002G045200 Sobic002G045200 Sobic009G211800--Sobic002G045200 Sobic004G168700 Sobic004G168700 Sobic009G211800--Sobic004G168700 Sobic009G211800--Sobic001G201000 Sobic007G107950 Sobic007G107950 Sobic009G211800--Sobic007G107950 Sobic009G211800--Sobic010G211800 Sobic001G231200 Sobic001G231200 Sobic008G096200--Sobic001G231200 Sobic010G105400 Sobic010G105400 Sobic008G096200--Sobic010G105400 Sobic008G096200--Sobic010G211800 Sobic002G394500 Sobic002G394500 Sobic008G096200--Sobic002G394500 Sobic001G487200 Sobic001G487200 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic001G261549 Sobic001G261549 Sobic008G096200--Sobic001G261549 Sobic004G257600 Sobic004G257600 Sobic003G013000--Sobic004G257600 Sobic003G260700 Sobic003G260700 Sobic003G013000--Sobic003G260700 Sobic003G410600 Sobic003G410600 Sobic003G013000--Sobic003G410600 Sobic007G168900 Sobic007G168900 Sobic003G013000--Sobic007G168900 Sobic003G444100 Sobic003G444100 Sobic003G013000--Sobic003G444100 Sobic001G177900 Sobic001G177900 Sobic003G013000--Sobic001G177900 Sobic006G144300 Sobic006G144300 Sobic003G013000--Sobic006G144300 Sobic003G102000 Sobic003G102000 Sobic003G013000--Sobic003G102000 Sobic003G314900 Sobic003G314900 Sobic003G013000--Sobic003G314900 Sobic001G437500 Sobic001G437500 Sobic001G196000--Sobic001G437500 Sobic007G139500 Sobic007G139500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic009G206500 Sobic009G206500 Sobic001G196000--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G159800 Sobic001G159800 Sobic001G196000--Sobic001G159800
Octagon: transcription factors


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