Gene annotation
Transcriptome id Sobic.001G231200.1
Synonym Sb01g020270
Functional annotation expressed protein
UniProt C5WZI3
Pfam -
Panther DB PTHR31469 PTHR31469:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12700 : -
RAP-DB (Rice) LOC_Os10g31810.1 : expressed protein
MaizeGDB (Corn) Zm00025a006733
Brachypodium KQJ96945
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.001G231200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
3 Sobic.002G370400 expressed protein -
4 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
5 Sobic.010G105400 chromosome condensation protein like, putative, expressed K06678: YCG1, condensin complex subunit 3
6 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
7 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
8 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
9 Sobic.002G394500 proline-rich family protein, putative, expressed -
10 Sobic.004G357500 expressed protein -
11 Sobic.003G260700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
12 Sobic.003G307200 expressed protein -
13 Sobic.002G417000 expressed protein -
14 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
15 Sobic.001G398400 expressed protein -
16 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
17 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
18 Sobic.003G230000 serine/threonine-protein kinase, putative, expressed -
19 Sobic.005G000500 kinesin motor domain containing protein, putative, expressed K10398: KIF11, kinesin family member 11
20 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T


Gene co-expression network
sample Sobic001G231200 Sobic001G231200 Sobic008G096200 Sobic008G096200 Sobic001G231200--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic001G231200--Sobic001G487200 Sobic002G370400 Sobic002G370400 Sobic001G231200--Sobic002G370400 Sobic010G211800 Sobic010G211800 Sobic001G231200--Sobic010G211800 Sobic010G105400 Sobic010G105400 Sobic001G231200--Sobic010G105400 Sobic010G129700 Sobic010G129700 Sobic001G231200--Sobic010G129700 Sobic003G013000 Sobic003G013000 Sobic001G231200--Sobic003G013000 Sobic003G444100 Sobic003G444100 Sobic001G231200--Sobic003G444100 Sobic002G394500 Sobic002G394500 Sobic001G231200--Sobic002G394500 Sobic008G096200--Sobic001G231200 Sobic008G096200--Sobic010G105400 Sobic008G096200--Sobic010G211800 Sobic008G096200--Sobic002G394500 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic001G261549 Sobic001G261549 Sobic008G096200--Sobic001G261549 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic002G370400--Sobic001G487200 Sobic002G370400--Sobic001G231200 Sobic002G370400--Sobic004G315700 Sobic006G272500 Sobic006G272500 Sobic002G370400--Sobic006G272500 Sobic002G370400--Sobic009G212100 Sobic002G370400--Sobic001G296800 Sobic009G124800 Sobic009G124800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic002G370400--Sobic010G211800 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic010G211800--Sobic006G241800 Sobic010G211800--Sobic008G096200 Sobic010G105400--Sobic005G144600 Sobic004G047100 Sobic004G047100 Sobic010G105400--Sobic004G047100 Sobic009G184200 Sobic009G184200 Sobic010G105400--Sobic009G184200 Sobic005G000500 Sobic005G000500 Sobic010G105400--Sobic005G000500 Sobic001G398400 Sobic001G398400 Sobic010G105400--Sobic001G398400 Sobic003G179500 Sobic003G179500 Sobic010G105400--Sobic003G179500 Sobic006G124400 Sobic006G124400 Sobic010G105400--Sobic006G124400 Sobic007G168900 Sobic007G168900 Sobic010G105400--Sobic007G168900 Sobic002G204400 Sobic002G204400 Sobic010G105400--Sobic002G204400 Sobic002G313000 Sobic002G313000 Sobic010G129700--Sobic002G313000 Sobic010G129700--Sobic009G184200 Sobic010G129700--Sobic001G398400 Sobic003G260700 Sobic003G260700 Sobic010G129700--Sobic003G260700 Sobic001G493900 Sobic001G493900 Sobic010G129700--Sobic001G493900 Sobic008G114900 Sobic008G114900 Sobic010G129700--Sobic008G114900 Sobic004G267600 Sobic004G267600 Sobic010G129700--Sobic004G267600 Sobic007G116800 Sobic007G116800 Sobic010G129700--Sobic007G116800 Sobic008G006800 Sobic008G006800 Sobic010G129700--Sobic008G006800 Sobic004G257600 Sobic004G257600 Sobic003G013000--Sobic004G257600 Sobic003G013000--Sobic003G260700 Sobic003G410600 Sobic003G410600 Sobic003G013000--Sobic003G410600 Sobic003G013000--Sobic007G168900 Sobic003G013000--Sobic003G444100 Sobic001G177900 Sobic001G177900 Sobic003G013000--Sobic001G177900 Sobic006G144300 Sobic006G144300 Sobic003G013000--Sobic006G144300 Sobic003G102000 Sobic003G102000 Sobic003G013000--Sobic003G102000 Sobic003G314900 Sobic003G314900 Sobic003G013000--Sobic003G314900 Sobic003G444100--Sobic005G000500 Sobic001G170800 Sobic001G170800 Sobic003G444100--Sobic001G170800 Sobic003G444100--Sobic003G260700 Sobic003G444100--Sobic007G168900 Sobic003G444100--Sobic001G177900 Sobic003G444100--Sobic001G398400 Sobic003G444100--Sobic004G257600 Sobic003G444100--Sobic003G314900 Sobic003G444100--Sobic010G105400 Sobic001G155700 Sobic001G155700 Sobic002G394500--Sobic001G155700 Sobic006G219500 Sobic006G219500 Sobic002G394500--Sobic006G219500 Sobic010G241100 Sobic010G241100 Sobic002G394500--Sobic010G241100 Sobic006G105600 Sobic006G105600 Sobic002G394500--Sobic006G105600 Sobic002G319300 Sobic002G319300 Sobic002G394500--Sobic002G319300 Sobic010G192500 Sobic010G192500 Sobic002G394500--Sobic010G192500 Sobic002G394500--Sobic003G260700 Sobic002G394500--Sobic008G114900 Sobic002G394500--Sobic002G313000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.