Gene annotation
Transcriptome id Sobic.002G417000.1
Synonym Sb02g042900
Functional annotation expressed protein
UniProt C5X5L1
Pfam PF05701
Panther DB PTHR32054 PTHR32054:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G26570 : Plant protein of unknown function (DUF827)
RAP-DB (Rice) LOC_Os07g48080.1 : expressed protein
MaizeGDB (Corn) Zm00025a015434
Brachypodium KQK14649
Barley HORVU2Hr1G018380.8 , HORVU2Hr1G018380.9 , HORVU2Hr1G018380.2 , HORVU2Hr1G018380.3 , HORVU2Hr1G018380.6 , HORVU2Hr1G018380.7 , HORVU2Hr1G018380.4 , HORVU2Hr1G018380.5
Wheat TraesCS2D02G107200 , TraesCS2A02G106600 , TraesCS2B02G124200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G360500 expressed protein -
2 Sobic.001G493900 beta-galactosidase, putative, expressed -
3 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
4 Sobic.003G307200 expressed protein -
5 Sobic.008G114900 rhoGAP domain containing protein, expressed -
6 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
8 Sobic.002G074000 expressed protein -
9 Sobic.006G221800 OsFBX46 - F-box domain containing protein, expressed -
10 Sobic.001G518000 protein kinase, putative, expressed -
11 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
12 Sobic.003G102000 expressed protein -
13 Sobic.008G006800 inactive receptor kinase At2g26730 precursor, putative, expressed -
14 Sobic.002G313000 targeting protein-related, putative, expressed K16812: targeting protein for Xklp2
15 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
16 Sobic.008G093600 expressed protein -
17 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
18 Sobic.001G155700 expansin precursor, putative, expressed -
19 Sobic.008G125700 similar to F22D16.26 protein(PubMedID : 29862293)@CSLD4 - cellulose synthase-like family D, expressed K00770: 1,4-beta-D-xylan synthase
20 Sobic.008G160400 KIP1, putative, expressed -


Gene co-expression network
sample Sobic002G417000 Sobic002G417000 Sobic002G360500 Sobic002G360500 Sobic002G417000--Sobic002G360500 Sobic001G493900 Sobic001G493900 Sobic002G417000--Sobic001G493900 Sobic004G267600 Sobic004G267600 Sobic002G417000--Sobic004G267600 Sobic003G307200 Sobic003G307200 Sobic002G417000--Sobic003G307200 Sobic008G114900 Sobic008G114900 Sobic002G417000--Sobic008G114900 Sobic010G211800 Sobic010G211800 Sobic002G417000--Sobic010G211800 Sobic010G192500 Sobic010G192500 Sobic002G417000--Sobic010G192500 Sobic002G074000 Sobic002G074000 Sobic002G417000--Sobic002G074000 Sobic006G221800 Sobic006G221800 Sobic002G417000--Sobic006G221800 Sobic002G360500--Sobic002G417000 Sobic001G518000 Sobic001G518000 Sobic002G360500--Sobic001G518000 Sobic002G360500--Sobic003G307200 Sobic002G360500--Sobic001G493900 Sobic004G003700 Sobic004G003700 Sobic002G360500--Sobic004G003700 Sobic002G360500--Sobic010G211800 Sobic002G360500--Sobic008G114900 Sobic001G155700 Sobic001G155700 Sobic002G360500--Sobic001G155700 Sobic008G006800 Sobic008G006800 Sobic002G360500--Sobic008G006800 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic010G129700 Sobic010G129700 Sobic001G493900--Sobic010G129700 Sobic002G319300 Sobic002G319300 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic004G267600--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic004G267600--Sobic002G284100 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic003G307200--Sobic002G319300 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic003G307200--Sobic002G417000 Sobic003G307200--Sobic001G155700 Sobic003G307200--Sobic006G221800 Sobic003G307200--Sobic002G074000 Sobic003G307200--Sobic001G518000 Sobic001G379900 Sobic001G379900 Sobic003G307200--Sobic001G379900 Sobic008G125700 Sobic008G125700 Sobic008G114900--Sobic008G125700 Sobic002G313000 Sobic002G313000 Sobic008G114900--Sobic002G313000 Sobic008G114900--Sobic001G155700 Sobic010G119300 Sobic010G119300 Sobic008G114900--Sobic010G119300 Sobic006G219500 Sobic006G219500 Sobic008G114900--Sobic006G219500 Sobic008G114900--Sobic002G319300 Sobic003G260700 Sobic003G260700 Sobic008G114900--Sobic003G260700 Sobic008G114900--Sobic001G493900 Sobic008G114900--Sobic008G006800 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic010G211800--Sobic002G360500 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic010G211800--Sobic006G241800 Sobic008G096200 Sobic008G096200 Sobic010G211800--Sobic008G096200 Sobic009G060800 Sobic009G060800 Sobic010G192500--Sobic009G060800 Sobic003G089300 Sobic003G089300 Sobic010G192500--Sobic003G089300 Sobic002G337600 Sobic002G337600 Sobic010G192500--Sobic002G337600 Sobic003G366000 Sobic003G366000 Sobic010G192500--Sobic003G366000 Sobic010G241100 Sobic010G241100 Sobic010G192500--Sobic010G241100 Sobic010G192500--Sobic001G155700 Sobic010G192500--Sobic001G493900 Sobic010G192500--Sobic002G319300 Sobic009G208300 Sobic009G208300 Sobic010G192500--Sobic009G208300 Sobic002G074000--Sobic003G307200 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic002G074000--Sobic004G267600 Sobic002G074000--Sobic001G493900 Sobic001G008300 Sobic001G008300 Sobic002G074000--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic002G074000--Sobic009G202801 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600 Sobic001G496400 Sobic001G496400 Sobic006G221800--Sobic001G496400 Sobic001G101700 Sobic001G101700 Sobic006G221800--Sobic001G101700 Sobic006G221800--Sobic008G114900 Sobic006G221800--Sobic004G003700 Sobic002G050700 Sobic002G050700 Sobic006G221800--Sobic002G050700 Sobic008G151600 Sobic008G151600 Sobic006G221800--Sobic008G151600 Sobic006G221800--Sobic002G319300 Sobic009G087700 Sobic009G087700 Sobic006G221800--Sobic009G087700 Sobic006G221800--Sobic001G493900
Octagon: transcription factors


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