Gene annotation
Transcriptome id Sobic.002G074000.1
Synonym Sb02g006190
Functional annotation expressed protein
UniProt C5XCR1
Pfam PF08263 PF07714 PF13855
Panther DB PTHR27000 PTHR27000:SF38
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding


Orthologs (automatic annotation)
TAIR AT2G41820 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os07g10630.1 : expressed protein
MaizeGDB (Corn) Zm00025a013418 , Zm00025a045368
Brachypodium PNT76836
Barley HORVU3Hr1G027760.3 , HORVU3Hr1G027760.2 , HORVU3Hr1G027760.1 , HORVU3Hr1G027760.4
Wheat TraesCS3B02G162500 , TraesCS3B02G162500 , TraesCS3D02G145100 , TraesCS3A02G142200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G307200 expressed protein -
2 Sobic.002G417000 expressed protein -
3 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
4 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
5 Sobic.001G493900 beta-galactosidase, putative, expressed -
6 Sobic.001G008300 expressed protein -
7 Sobic.009G202801 - K10406: kinesin family member C2/C3
8 Sobic.010G129700 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
9 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
10 Sobic.003G031700 protein kinase family protein, putative, expressed -
11 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
12 Sobic.010G192500 anthranilate phosphoribosyltransferase, putative, expressed -
13 Sobic.002G335900 cyclin, putative, expressed K18812: cyclin D6, plant
14 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
15 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
16 Sobic.001G379900 potassium transporter, putative, expressed K03549: KUP system potassium uptake protein
17 Sobic.006G219500 remorin family protein, putative, expressed -
18 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
19 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
20 Sobic.001G155700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic002G074000 Sobic002G074000 Sobic003G307200 Sobic003G307200 Sobic002G074000--Sobic003G307200 Sobic002G417000 Sobic002G417000 Sobic002G074000--Sobic002G417000 Sobic007G087800 Sobic007G087800 Sobic002G074000--Sobic007G087800 Sobic004G267600 Sobic004G267600 Sobic002G074000--Sobic004G267600 Sobic001G493900 Sobic001G493900 Sobic002G074000--Sobic001G493900 Sobic001G008300 Sobic001G008300 Sobic002G074000--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic002G074000--Sobic009G202801 Sobic010G129700 Sobic010G129700 Sobic002G074000--Sobic010G129700 Sobic005G055600 Sobic005G055600 Sobic002G074000--Sobic005G055600 Sobic002G319300 Sobic002G319300 Sobic003G307200--Sobic002G319300 Sobic002G360500 Sobic002G360500 Sobic003G307200--Sobic002G360500 Sobic003G307200--Sobic001G493900 Sobic003G307200--Sobic002G417000 Sobic001G155700 Sobic001G155700 Sobic003G307200--Sobic001G155700 Sobic006G221800 Sobic006G221800 Sobic003G307200--Sobic006G221800 Sobic003G307200--Sobic002G074000 Sobic001G518000 Sobic001G518000 Sobic003G307200--Sobic001G518000 Sobic001G379900 Sobic001G379900 Sobic003G307200--Sobic001G379900 Sobic002G417000--Sobic002G360500 Sobic002G417000--Sobic001G493900 Sobic002G417000--Sobic004G267600 Sobic002G417000--Sobic003G307200 Sobic008G114900 Sobic008G114900 Sobic002G417000--Sobic008G114900 Sobic010G211800 Sobic010G211800 Sobic002G417000--Sobic010G211800 Sobic010G192500 Sobic010G192500 Sobic002G417000--Sobic010G192500 Sobic002G417000--Sobic002G074000 Sobic002G417000--Sobic006G221800 Sobic007G116800 Sobic007G116800 Sobic007G087800--Sobic007G116800 Sobic010G092400 Sobic010G092400 Sobic007G087800--Sobic010G092400 Sobic004G246500 Sobic004G246500 Sobic007G087800--Sobic004G246500 Sobic007G087800--Sobic002G074000 Sobic003G031700 Sobic003G031700 Sobic007G087800--Sobic003G031700 Sobic007G087800--Sobic001G493900 Sobic007G087800--Sobic010G129700 Sobic007G087800--Sobic004G267600 Sobic006G014400 Sobic006G014400 Sobic007G087800--Sobic006G014400 Sobic004G267600--Sobic001G493900 Sobic002G284100 Sobic002G284100 Sobic004G267600--Sobic002G284100 Sobic004G267600--Sobic010G129700 Sobic006G142500 Sobic006G142500 Sobic004G267600--Sobic006G142500 Sobic002G027600 Sobic002G027600 Sobic004G267600--Sobic002G027600 Sobic006G272800 Sobic006G272800 Sobic004G267600--Sobic006G272800 Sobic004G267600--Sobic002G417000 Sobic005G032600 Sobic005G032600 Sobic004G267600--Sobic005G032600 Sobic005G062600 Sobic005G062600 Sobic004G267600--Sobic005G062600 Sobic001G493900--Sobic004G267600 Sobic003G019900 Sobic003G019900 Sobic001G493900--Sobic003G019900 Sobic001G493900--Sobic010G129700 Sobic001G493900--Sobic002G319300 Sobic001G493900--Sobic008G114900 Sobic001G493900--Sobic001G155700 Sobic001G493900--Sobic010G192500 Sobic001G493900--Sobic002G417000 Sobic003G338700 Sobic003G338700 Sobic001G493900--Sobic003G338700 Sobic001G008300--Sobic002G319300 Sobic006G193100 Sobic006G193100 Sobic001G008300--Sobic006G193100 Sobic007G160300 Sobic007G160300 Sobic001G008300--Sobic007G160300 Sobic001G008300--Sobic010G192500 Sobic001G008300--Sobic001G155700 Sobic001G390400 Sobic001G390400 Sobic001G008300--Sobic001G390400 Sobic001G008300--Sobic003G031700 Sobic001G008300--Sobic001G493900 Sobic001G008300--Sobic009G202801 Sobic003G292700 Sobic003G292700 Sobic009G202801--Sobic003G292700 Sobic009G202801--Sobic006G193100 Sobic009G202801--Sobic003G031700 Sobic003G315700 Sobic003G315700 Sobic009G202801--Sobic003G315700 Sobic009G202801--Sobic006G142500 Sobic009G202801--Sobic001G008300 Sobic009G202801--Sobic002G074000 Sobic002G317700 Sobic002G317700 Sobic009G202801--Sobic002G317700 Sobic009G202801--Sobic004G246500 Sobic002G313000 Sobic002G313000 Sobic010G129700--Sobic002G313000 Sobic009G184200 Sobic009G184200 Sobic010G129700--Sobic009G184200 Sobic001G398400 Sobic001G398400 Sobic010G129700--Sobic001G398400 Sobic003G260700 Sobic003G260700 Sobic010G129700--Sobic003G260700 Sobic010G129700--Sobic001G493900 Sobic010G129700--Sobic008G114900 Sobic010G129700--Sobic004G267600 Sobic010G129700--Sobic007G116800 Sobic008G006800 Sobic008G006800 Sobic010G129700--Sobic008G006800 Sobic004G328300 Sobic004G328300 Sobic005G055600--Sobic004G328300 Sobic001G201000 Sobic001G201000 Sobic005G055600--Sobic001G201000 Sobic001G285200 Sobic001G285200 Sobic005G055600--Sobic001G285200 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic005G055600--Sobic009G202801 Sobic009G175100 Sobic009G175100 Sobic005G055600--Sobic009G175100 Sobic005G055600--Sobic007G087800 Sobic001G023500 Sobic001G023500 Sobic005G055600--Sobic001G023500
Octagon: transcription factors


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