Gene annotation
Transcriptome id Sobic.006G193100.1
Synonym Sb06g026590
Functional annotation zinc finger family protein, putative, expressed
UniProt C5YEL3
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF72
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology K18932; palmitoyltransferase
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G15080 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os04g49560.1 : zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a010053
Brachypodium KQJ84242
Barley HORVU2Hr1G104880.6 , HORVU2Hr1G104880.20 , HORVU2Hr1G104880.21 , HORVU2Hr1G104880.16 , HORVU2Hr1G104880.3 , HORVU2Hr1G104880.2 , HORVU2Hr1G104880.1 , HORVU2Hr1G104880.7 , HORVU2Hr1G104880.5 , HORVU2Hr1G104880.4 , HORVU2Hr1G104880.9 , HORVU2Hr1G104880.8 , HORVU2Hr1G104880.13 , HORVU2Hr1G104880.12 , HORVU2Hr1G104880.11 , HORVU2Hr1G104880.10 , HORVU2Hr1G104880.17 , HORVU2Hr1G104880.15 , HORVU2Hr1G104880.14 , HORVU2Hr1G104880.19 , HORVU2Hr1G104880.18
Wheat TraesCS2A02G455300 , TraesCS2B02G477400 , TraesCS2D02G455700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G031700 protein kinase family protein, putative, expressed -
2 Sobic.001G008300 expressed protein -
3 Sobic.009G202801 - K10406: kinesin family member C2/C3
4 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
5 Sobic.004G328300 expressed protein -
6 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
7 Sobic.002G319300 IQ calmodulin-binding motif family protein, expressed K16743: ASPM, abnormal spindle-like microcephaly-associated protein
8 Sobic.009G136000 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
9 Sobic.002G204400 kinesin motor protein-related, putative, expressed K11498: centromeric protein E
10 Sobic.007G076200 VERNALIZATION-INSENSITIVE, putative, expressed -
11 Sobic.009G175100 inactive receptor kinase At2g26730 precursor, putative, expressed -
12 Sobic.003G032200 IQ calmodulin-binding motif domain containing protein, expressed -
13 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
14 Sobic.003G336900 inactive receptor kinase At2g26730 precursor, putative, expressed -
15 Sobic.009G184200 RecF/RecN/SMC N terminal domain containing protein, expressed K06675: structural maintenance of chromosome 4
16 Sobic.007G087800 expressed protein K06085: SSX2IP, synovial sarcoma, X breakpoint 2 interacting protein
17 Sobic.008G131900 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed -
18 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
19 Sobic.004G063600 CYPRO4, putative, expressed -
20 Sobic.001G155700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic006G193100 Sobic006G193100 Sobic003G031700 Sobic003G031700 Sobic006G193100--Sobic003G031700 Sobic001G008300 Sobic001G008300 Sobic006G193100--Sobic001G008300 Sobic009G202801 Sobic009G202801 Sobic006G193100--Sobic009G202801 Sobic003G315700 Sobic003G315700 Sobic006G193100--Sobic003G315700 Sobic004G328300 Sobic004G328300 Sobic006G193100--Sobic004G328300 Sobic008G148000 Sobic008G148000 Sobic006G193100--Sobic008G148000 Sobic002G319300 Sobic002G319300 Sobic006G193100--Sobic002G319300 Sobic009G136000 Sobic009G136000 Sobic006G193100--Sobic009G136000 Sobic002G204400 Sobic002G204400 Sobic006G193100--Sobic002G204400 Sobic002G362700 Sobic002G362700 Sobic003G031700--Sobic002G362700 Sobic002G320600 Sobic002G320600 Sobic003G031700--Sobic002G320600 Sobic003G031700--Sobic006G193100 Sobic001G074100 Sobic001G074100 Sobic003G031700--Sobic001G074100 Sobic003G031700--Sobic009G202801 Sobic001G522300 Sobic001G522300 Sobic003G031700--Sobic001G522300 Sobic003G031700--Sobic001G008300 Sobic010G211800 Sobic010G211800 Sobic003G031700--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic003G031700--Sobic007G087800 Sobic001G008300--Sobic002G319300 Sobic001G008300--Sobic006G193100 Sobic007G160300 Sobic007G160300 Sobic001G008300--Sobic007G160300 Sobic010G192500 Sobic010G192500 Sobic001G008300--Sobic010G192500 Sobic001G155700 Sobic001G155700 Sobic001G008300--Sobic001G155700 Sobic001G390400 Sobic001G390400 Sobic001G008300--Sobic001G390400 Sobic001G008300--Sobic003G031700 Sobic001G493900 Sobic001G493900 Sobic001G008300--Sobic001G493900 Sobic001G008300--Sobic009G202801 Sobic003G292700 Sobic003G292700 Sobic009G202801--Sobic003G292700 Sobic009G202801--Sobic006G193100 Sobic009G202801--Sobic003G031700 Sobic009G202801--Sobic003G315700 Sobic006G142500 Sobic006G142500 Sobic009G202801--Sobic006G142500 Sobic009G202801--Sobic001G008300 Sobic002G074000 Sobic002G074000 Sobic009G202801--Sobic002G074000 Sobic002G317700 Sobic002G317700 Sobic009G202801--Sobic002G317700 Sobic004G246500 Sobic004G246500 Sobic009G202801--Sobic004G246500 Sobic003G315700--Sobic008G148000 Sobic003G315700--Sobic006G193100 Sobic004G306100 Sobic004G306100 Sobic003G315700--Sobic004G306100 Sobic002G290000 Sobic002G290000 Sobic003G315700--Sobic002G290000 Sobic003G315700--Sobic009G202801 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic002G113400 Sobic002G113400 Sobic003G315700--Sobic002G113400 Sobic009G052100 Sobic009G052100 Sobic003G315700--Sobic009G052100 Sobic005G055600 Sobic005G055600 Sobic004G328300--Sobic005G055600 Sobic004G328300--Sobic006G193100 Sobic004G328300--Sobic003G315700 Sobic004G053900 Sobic004G053900 Sobic004G328300--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic004G328300--Sobic001G025900 Sobic001G023500 Sobic001G023500 Sobic004G328300--Sobic001G023500 Sobic001G154300 Sobic001G154300 Sobic004G328300--Sobic001G154300 Sobic004G328300--Sobic009G202801 Sobic004G328300--Sobic002G113400 Sobic005G000500 Sobic005G000500 Sobic008G148000--Sobic005G000500 Sobic008G148000--Sobic002G204400 Sobic001G170800 Sobic001G170800 Sobic008G148000--Sobic001G170800 Sobic010G008900 Sobic010G008900 Sobic008G148000--Sobic010G008900 Sobic007G168900 Sobic007G168900 Sobic008G148000--Sobic007G168900 Sobic004G271300 Sobic004G271300 Sobic008G148000--Sobic004G271300 Sobic003G444100 Sobic003G444100 Sobic008G148000--Sobic003G444100 Sobic003G314900 Sobic003G314900 Sobic008G148000--Sobic003G314900 Sobic009G184200 Sobic009G184200 Sobic008G148000--Sobic009G184200 Sobic002G319300--Sobic001G155700 Sobic008G114900 Sobic008G114900 Sobic002G319300--Sobic008G114900 Sobic002G319300--Sobic001G493900 Sobic002G313000 Sobic002G313000 Sobic002G319300--Sobic002G313000 Sobic003G307200 Sobic003G307200 Sobic002G319300--Sobic003G307200 Sobic002G319300--Sobic010G192500 Sobic002G319300--Sobic001G008300 Sobic006G221800 Sobic006G221800 Sobic002G319300--Sobic006G221800 Sobic006G219500 Sobic006G219500 Sobic002G319300--Sobic006G219500 Sobic010G038200 Sobic010G038200 Sobic009G136000--Sobic010G038200 Sobic001G082800 Sobic001G082800 Sobic009G136000--Sobic001G082800 Sobic009G125800 Sobic009G125800 Sobic009G136000--Sobic009G125800 Sobic008G131900 Sobic008G131900 Sobic009G136000--Sobic008G131900 Sobic010G030000 Sobic010G030000 Sobic009G136000--Sobic010G030000 Sobic009G136000--Sobic006G193100 Sobic002G390800 Sobic002G390800 Sobic009G136000--Sobic002G390800 Sobic009G131200 Sobic009G131200 Sobic009G136000--Sobic009G131200 Sobic002G052800 Sobic002G052800 Sobic009G136000--Sobic002G052800 Sobic002G204400--Sobic009G184200 Sobic002G204400--Sobic008G148000 Sobic003G393100 Sobic003G393100 Sobic002G204400--Sobic003G393100 Sobic010G105400 Sobic010G105400 Sobic002G204400--Sobic010G105400 Sobic006G281400 Sobic006G281400 Sobic002G204400--Sobic006G281400 Sobic002G204400--Sobic005G000500 Sobic007G027900 Sobic007G027900 Sobic002G204400--Sobic007G027900 Sobic001G398400 Sobic001G398400 Sobic002G204400--Sobic001G398400 Sobic002G204400--Sobic004G271300
Octagon: transcription factors


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