Gene annotation
| Transcriptome id | Sobic.003G336900.1 |
|---|---|
| Synonym | Sb03g038110 |
| Functional annotation | inactive receptor kinase At2g26730 precursor, putative, expressed |
| UniProt | C5XN93 |
| Pfam | PF00560 PF08263 PF07714 |
| Panther DB | PTHR27008 PTHR27008:SF18 |
| NCBI CDD | KOG1187; Serine/threonine protein kinase |
| KEGG Orthology | - |
| Gene Ontology | GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity |
Orthologs (automatic annotation)
| TAIR | AT5G58300 : Leucine-rich repeat protein kinase family protein |
|---|---|
| RAP-DB (Rice) | LOC_Os01g60330.1 : inactive receptor kinase At2g26730 precursor, putative, expressed |
| MaizeGDB (Corn) | Zm00025a039776 , Zm00025a027072 , Zm00025a044006 |
| Brachypodium | KQK10334 , KQK10335 , PNT73116 , PNT73114 , PNT73115 , KQK05730 , KQK10336 |
| Barley | HORVU3Hr1G080740.6 , HORVU3Hr1G080740.4 , HORVU3Hr1G080740.5 , HORVU3Hr1G080740.2 , HORVU3Hr1G080740.3 , HORVU3Hr1G080740.1 , HORVU1Hr1G069510.4 , HORVU1Hr1G069510.5 , HORVU1Hr1G069510.6 , HORVU1Hr1G069510.1 , HORVU1Hr1G069510.2 , HORVU1Hr1G069510.3 |
| Wheat | TraesCS3D02G336200 , TraesCS1D02G301400 , TraesCS1A02G301800 , TraesCS1A02G301800 , TraesCS1B02G311700 , TraesCS3B02G374400 , TraesCS3A02G342300 , TraesCS1B02G311800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.009G158900 | zinc finger, C3HC4 type domain containing protein, expressed | - |
| 2 | Sobic.009G024900 | CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | K08850: aurora kinase, other |
| 3 | Sobic.006G193100 | zinc finger family protein, putative, expressed | K18932: palmitoyltransferase |
| 4 | Sobic.008G131900 | Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@resistance protein LR10, putative, expressed | - |
| 5 | Sobic.010G024000 | transketolase, chloroplast precursor, putative, expressed | K00615: E2.2.1.1, tktA, transketolase |
| 6 | Sobic.002G173400 | expressed protein | - |
| 7 | Sobic.009G175100 | inactive receptor kinase At2g26730 precursor, putative, expressed | - |
| 8 | Sobic.008G004900 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein | - |
| 9 | Sobic.001G026800 | polygalacturonase, putative, expressed | - |
| 10 | Sobic.003G411700 | heat shock protein DnaJ, putative, expressed | - |
| 11 | Sobic.009G120400 | methyltransferase, putative, expressed | - |
| 12 | Sobic.001G425200 | expressed protein | - |
| 13 | Sobic.004G006000 | hypothetical protein | - |
| 14 | Sobic.003G409600 | zinc finger DHHC domain-containing protein, putative, expressed | K16675: palmitoyltransferase ZDHHC9/14/18 |
| 15 | Sobic.003G045000 | serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed | K11584: serine/threonine-protein phosphatase 2A regulatory subunit B' |
| 16 | Sobic.003G315700 | AAA-type ATPase family protein, putative, expressed | - |
| 17 | Sobic.008G169400 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed | - |
| 18 | Sobic.009G131200 | expressed protein | - |
| 19 | Sobic.004G102200 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed | K09874: aquaporin NIP |
| 20 | Sobic.001G008300 | expressed protein | - |
Gene co-expression network
Octagon: transcription factors
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