Gene annotation
Transcriptome id Sobic.003G409600.1
Synonym Sb03g044420
Functional annotation zinc finger DHHC domain-containing protein, putative, expressed
UniProt A0A1B6Q7Y1
Pfam PF01529
Panther DB PTHR22883 PTHR22883:SF95
NCBI CDD KOG1311; DHHC-type Zn-finger proteins
KEGG Orthology K16675; palmitoyltransferase ZDHHC9/14/18
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT3G26935 : DHHC-type zinc finger family protein
RAP-DB (Rice) LOC_Os01g70100.1 : zinc finger DHHC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a039258 , Zm00025a002285 , Zm00025a026216 , Zm00025a043266
Brachypodium KQK11299
Barley HORVU3Hr1G095750.9 , HORVU3Hr1G095750.8 , HORVU3Hr1G095750.7 , HORVU3Hr1G095750.6 , HORVU3Hr1G095750.5 , HORVU3Hr1G095750.4 , HORVU3Hr1G095750.3 , HORVU3Hr1G095750.2 , HORVU3Hr1G095750.10
Wheat TraesCS3A02G438700 , TraesCS3D02G431100 , TraesCS3B02G472600
Populus PNS22568 , PNT53130 , PNT53129


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cDNA sequences
Sobic.003G409600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G306100 expressed protein -
2 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
3 Sobic.007G219100 phosphatidylinositol transfer, putative, expressed -
4 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
5 Sobic.006G127200 kelch repeat protein, putative, expressed -
6 Sobic.009G202801 - K10406: kinesin family member C2/C3
7 Sobic.010G103500 ATMAP70 protein, putative, expressed -
8 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
9 Sobic.010G052400 SET domain containing protein, expressed K11430: [histone H3]-lysine27 N-trimethyltransferase EZH2
10 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
11 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
12 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
13 Sobic.001G026800 polygalacturonase, putative, expressed -
14 Sobic.003G292700 kinesin motor protein-related, putative, expressed K10406: kinesin family member C2/C3
15 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
16 Sobic.003G031700 protein kinase family protein, putative, expressed -
17 Sobic.003G336900 inactive receptor kinase At2g26730 precursor, putative, expressed -
18 Sobic.009G005700 FYVE zinc finger domain containing protein, expressed -
19 Sobic.002G383100 expressed protein -
20 Sobic.005G064100 expressed protein -


Gene co-expression network
sample Sobic003G409600 Sobic003G409600 Sobic004G306100 Sobic004G306100 Sobic003G409600--Sobic004G306100 Sobic003G315700 Sobic003G315700 Sobic003G409600--Sobic003G315700 Sobic007G219100 Sobic007G219100 Sobic003G409600--Sobic007G219100 Sobic002G271400 Sobic002G271400 Sobic003G409600--Sobic002G271400 Sobic006G127200 Sobic006G127200 Sobic003G409600--Sobic006G127200 Sobic009G202801 Sobic009G202801 Sobic003G409600--Sobic009G202801 Sobic010G103500 Sobic010G103500 Sobic003G409600--Sobic010G103500 Sobic003G411700 Sobic003G411700 Sobic003G409600--Sobic003G411700 Sobic010G052400 Sobic010G052400 Sobic003G409600--Sobic010G052400 Sobic004G306100--Sobic002G271400 Sobic004G306100--Sobic010G103500 Sobic004G306100--Sobic003G411700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic002G123600 Sobic002G123600 Sobic004G306100--Sobic002G123600 Sobic004G306100--Sobic010G052400 Sobic008G148000 Sobic008G148000 Sobic003G315700--Sobic008G148000 Sobic006G193100 Sobic006G193100 Sobic003G315700--Sobic006G193100 Sobic003G315700--Sobic004G306100 Sobic002G290000 Sobic002G290000 Sobic003G315700--Sobic002G290000 Sobic003G315700--Sobic009G202801 Sobic004G328300 Sobic004G328300 Sobic003G315700--Sobic004G328300 Sobic003G315700--Sobic003G409600 Sobic002G113400 Sobic002G113400 Sobic003G315700--Sobic002G113400 Sobic009G052100 Sobic009G052100 Sobic003G315700--Sobic009G052100 Sobic003G147500 Sobic003G147500 Sobic007G219100--Sobic003G147500 Sobic003G292700 Sobic003G292700 Sobic007G219100--Sobic003G292700 Sobic007G219100--Sobic003G409600 Sobic009G224300 Sobic009G224300 Sobic007G219100--Sobic009G224300 Sobic001G407100 Sobic001G407100 Sobic007G219100--Sobic001G407100 Sobic009G225500 Sobic009G225500 Sobic007G219100--Sobic009G225500 Sobic006G255300 Sobic006G255300 Sobic007G219100--Sobic006G255300 Sobic010G250400 Sobic010G250400 Sobic007G219100--Sobic010G250400 Sobic006G016700 Sobic006G016700 Sobic007G219100--Sobic006G016700 Sobic002G271400--Sobic004G306100 Sobic003G343200 Sobic003G343200 Sobic002G271400--Sobic003G343200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic001G025900 Sobic001G025900 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic006G127200--Sobic004G306100 Sobic006G127200--Sobic002G271400 Sobic010G257500 Sobic010G257500 Sobic006G127200--Sobic010G257500 Sobic006G127200--Sobic002G123600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic009G081800 Sobic009G081800 Sobic006G127200--Sobic009G081800 Sobic006G127200--Sobic010G103500 Sobic006G127200--Sobic001G025900 Sobic009G202801--Sobic003G292700 Sobic009G202801--Sobic006G193100 Sobic003G031700 Sobic003G031700 Sobic009G202801--Sobic003G031700 Sobic009G202801--Sobic003G315700 Sobic006G142500 Sobic006G142500 Sobic009G202801--Sobic006G142500 Sobic001G008300 Sobic001G008300 Sobic009G202801--Sobic001G008300 Sobic002G074000 Sobic002G074000 Sobic009G202801--Sobic002G074000 Sobic002G317700 Sobic002G317700 Sobic009G202801--Sobic002G317700 Sobic004G246500 Sobic004G246500 Sobic009G202801--Sobic004G246500 Sobic010G103500--Sobic002G260700 Sobic010G103500--Sobic004G306100 Sobic010G103500--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic010G103500--Sobic004G129500 Sobic007G036800 Sobic007G036800 Sobic010G103500--Sobic007G036800 Sobic001G296800 Sobic001G296800 Sobic010G103500--Sobic001G296800 Sobic004G315700 Sobic004G315700 Sobic010G103500--Sobic004G315700 Sobic010G103500--Sobic002G271400 Sobic010G103500--Sobic010G052400 Sobic003G411700--Sobic010G222800 Sobic003G411700--Sobic004G306100 Sobic003G411700--Sobic002G271400 Sobic003G411700--Sobic010G103500 Sobic001G425200 Sobic001G425200 Sobic003G411700--Sobic001G425200 Sobic003G411700--Sobic003G343200 Sobic001G212600 Sobic001G212600 Sobic003G411700--Sobic001G212600 Sobic003G411700--Sobic010G024000 Sobic005G160200 Sobic005G160200 Sobic003G411700--Sobic005G160200 Sobic010G052400--Sobic004G306100 Sobic010G052400--Sobic010G103500 Sobic010G052400--Sobic003G409600 Sobic010G052400--Sobic002G271400 Sobic010G052400--Sobic006G127200 Sobic010G052400--Sobic002G260700 Sobic004G001600 Sobic004G001600 Sobic010G052400--Sobic004G001600 Sobic010G052400--Sobic001G296800 Sobic010G052400--Sobic001G425200
Octagon: transcription factors


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