Gene annotation
Transcriptome id Sobic.006G127200.1
Synonym Sb06g020730
Functional annotation kelch repeat protein, putative, expressed
UniProt C5YAX9
Pfam PF01344 PF13964 PF13418
Panther DB PTHR24413 PTHR24413:SF137
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G51540 : Galactose oxidase/kelch repeat superfamily protein
RAP-DB (Rice) LOC_Os04g41020.1 : kelch repeat protein, putative, expressed
MaizeGDB (Corn) Zm00025a010941
Brachypodium KQJ83254
Barley HORVU2Hr1G084190.2 , HORVU2Hr1G084190.3 , HORVU2Hr1G084190.1 , HORVU2Hr1G084190.6 , HORVU2Hr1G084190.7 , HORVU2Hr1G084190.4 , HORVU2Hr1G084190.8 , HORVU2Hr1G084190.9 , HORVU2Hr1G084190.10 , HORVU2Hr1G084190.11 , HORVU2Hr1G084190.12 , HORVU2Hr1G084190.13 , HORVU2Hr1G084190.14 , HORVU2Hr1G084190.15 , HORVU2Hr1G084190.16
Wheat TraesCS2A02G345800 , TraesCS2B02G364200 , TraesCS2D02G344500
Populus -


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cDNA sequences
Sobic.006G127200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G306100 expressed protein -
2 Sobic.002G271400 RNA recognition motif containing protein, putative, expressed -
3 Sobic.010G257500 expressed protein -
4 Sobic.002G123600 expressed protein -
5 Sobic.003G409600 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
6 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
7 Sobic.009G081800 helicase, putative, expressed K11273: DDX11, CHL1, chromosome transmission fidelity protein 1
8 Sobic.010G103500 ATMAP70 protein, putative, expressed -
9 Sobic.001G025900 expressed protein -
10 Sobic.008G090400 - -
11 Sobic.006G126800 expressed protein K10730: ATP-dependent DNA helicase Q4
12 Sobic.004G129500 expressed protein -
13 Sobic.010G018900 pentatricopeptide repeat domain containing protein, putative, expressed -
14 Sobic.004G095200 Peptidase family C50, putative, expressed K02365: separase
15 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
16 Sobic.002G095300 deoxynucleoside kinase family, putative, expressed K00893: deoxycitidine kinase
17 Sobic.002G113400 dnaJ domain containing protein, expressed -
18 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
19 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
20 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -


Gene co-expression network
sample Sobic006G127200 Sobic006G127200 Sobic004G306100 Sobic004G306100 Sobic006G127200--Sobic004G306100 Sobic002G271400 Sobic002G271400 Sobic006G127200--Sobic002G271400 Sobic010G257500 Sobic010G257500 Sobic006G127200--Sobic010G257500 Sobic002G123600 Sobic002G123600 Sobic006G127200--Sobic002G123600 Sobic003G409600 Sobic003G409600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic009G081800 Sobic009G081800 Sobic006G127200--Sobic009G081800 Sobic010G103500 Sobic010G103500 Sobic006G127200--Sobic010G103500 Sobic001G025900 Sobic001G025900 Sobic006G127200--Sobic001G025900 Sobic004G306100--Sobic002G271400 Sobic004G306100--Sobic010G103500 Sobic003G411700 Sobic003G411700 Sobic004G306100--Sobic003G411700 Sobic003G315700 Sobic003G315700 Sobic004G306100--Sobic003G315700 Sobic004G306100--Sobic006G127200 Sobic004G306100--Sobic003G409600 Sobic002G260700 Sobic002G260700 Sobic004G306100--Sobic002G260700 Sobic004G306100--Sobic002G123600 Sobic010G052400 Sobic010G052400 Sobic004G306100--Sobic010G052400 Sobic002G271400--Sobic004G306100 Sobic003G343200 Sobic003G343200 Sobic002G271400--Sobic003G343200 Sobic002G271400--Sobic006G127200 Sobic002G271400--Sobic003G411700 Sobic002G271400--Sobic001G025900 Sobic010G222800 Sobic010G222800 Sobic002G271400--Sobic010G222800 Sobic003G013800 Sobic003G013800 Sobic002G271400--Sobic003G013800 Sobic008G004900 Sobic008G004900 Sobic002G271400--Sobic008G004900 Sobic010G024000 Sobic010G024000 Sobic002G271400--Sobic010G024000 Sobic010G009600 Sobic010G009600 Sobic010G257500--Sobic010G009600 Sobic010G257500--Sobic003G343200 Sobic001G534400 Sobic001G534400 Sobic010G257500--Sobic001G534400 Sobic010G257500--Sobic006G127200 Sobic010G013400 Sobic010G013400 Sobic010G257500--Sobic010G013400 Sobic010G018900 Sobic010G018900 Sobic010G257500--Sobic010G018900 Sobic010G257500--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic010G257500--Sobic004G014100 Sobic010G038900 Sobic010G038900 Sobic010G257500--Sobic010G038900 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G123600--Sobic002G271400 Sobic003G397100 Sobic003G397100 Sobic002G123600--Sobic003G397100 Sobic001G242300 Sobic001G242300 Sobic002G123600--Sobic001G242300 Sobic002G123600--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic002G123600--Sobic004G129500 Sobic003G409600--Sobic004G306100 Sobic003G409600--Sobic003G315700 Sobic007G219100 Sobic007G219100 Sobic003G409600--Sobic007G219100 Sobic003G409600--Sobic002G271400 Sobic003G409600--Sobic006G127200 Sobic009G202801 Sobic009G202801 Sobic003G409600--Sobic009G202801 Sobic003G409600--Sobic010G103500 Sobic003G409600--Sobic003G411700 Sobic003G409600--Sobic010G052400 Sobic007G084200 Sobic007G084200 Sobic003G226700--Sobic007G084200 Sobic003G420300 Sobic003G420300 Sobic003G226700--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic003G226700--Sobic003G292700 Sobic001G425700 Sobic001G425700 Sobic003G226700--Sobic001G425700 Sobic003G289800 Sobic003G289800 Sobic003G226700--Sobic003G289800 Sobic009G212100 Sobic009G212100 Sobic003G226700--Sobic009G212100 Sobic001G487200 Sobic001G487200 Sobic003G226700--Sobic001G487200 Sobic004G315700 Sobic004G315700 Sobic003G226700--Sobic004G315700 Sobic003G024000 Sobic003G024000 Sobic003G226700--Sobic003G024000 Sobic006G126800 Sobic006G126800 Sobic009G081800--Sobic006G126800 Sobic010G252200 Sobic010G252200 Sobic009G081800--Sobic010G252200 Sobic003G041400 Sobic003G041400 Sobic009G081800--Sobic003G041400 Sobic009G081800--Sobic006G127200 Sobic001G530100 Sobic001G530100 Sobic009G081800--Sobic001G530100 Sobic001G239900 Sobic001G239900 Sobic009G081800--Sobic001G239900 Sobic010G269800 Sobic010G269800 Sobic009G081800--Sobic010G269800 Sobic005G210500 Sobic005G210500 Sobic009G081800--Sobic005G210500 Sobic006G119300 Sobic006G119300 Sobic009G081800--Sobic006G119300 Sobic010G103500--Sobic002G260700 Sobic010G103500--Sobic004G306100 Sobic010G103500--Sobic003G411700 Sobic010G103500--Sobic004G129500 Sobic007G036800 Sobic007G036800 Sobic010G103500--Sobic007G036800 Sobic001G296800 Sobic001G296800 Sobic010G103500--Sobic001G296800 Sobic010G103500--Sobic004G315700 Sobic010G103500--Sobic002G271400 Sobic010G103500--Sobic010G052400 Sobic001G013400 Sobic001G013400 Sobic001G025900--Sobic001G013400 Sobic002G113400 Sobic002G113400 Sobic001G025900--Sobic002G113400 Sobic002G290000 Sobic002G290000 Sobic001G025900--Sobic002G290000 Sobic001G025900--Sobic002G271400 Sobic005G110535 Sobic005G110535 Sobic001G025900--Sobic005G110535 Sobic004G321400 Sobic004G321400 Sobic001G025900--Sobic004G321400 Sobic004G053900 Sobic004G053900 Sobic001G025900--Sobic004G053900 Sobic004G328300 Sobic004G328300 Sobic001G025900--Sobic004G328300 Sobic006G236800 Sobic006G236800 Sobic001G025900--Sobic006G236800
Octagon: transcription factors


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