Gene annotation
Transcriptome id Sobic.002G232400.2,Sobic.002G232400.1,Sobic.002G232400.3
Synonym Sb02g027160
Functional annotation clathrin adaptor complex small chain domain containing protein, expressed
UniProt A0A1B6QD15 , A0A1B6QD28
Pfam PF01217
Panther DB PTHR11043 PTHR11043:SF7
NCBI CDD KOG3343; Vesicle coat complex COPI, zeta subunit
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09800 : SNARE-like superfamily protein
RAP-DB (Rice) LOC_Os02g21250.2,LOC_Os02g21250.1 : clathrin adaptor complex small chain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a047328
Brachypodium KQJ86971 , PNT62836 , PNT62835
Barley -
Wheat TraesCS5D02G173000 , TraesCS5B02G165500 , TraesCS5B02G165500
Populus -


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cDNA sequences
Sobic.002G232400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
2 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
3 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
4 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
5 Sobic.002G268700 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
6 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
7 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
8 Sobic.008G084100 adenylate kinase, putative, expressed K00939: adk, adenylate kinase
9 Sobic.010G018500 expressed protein -
10 Sobic.007G111300 transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
11 Sobic.002G192900 expressed protein -
12 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
13 Sobic.002G297500 coiled-coil domain-containing protein 111, putative, expressed -
14 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
15 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
16 Sobic.008G004900 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
17 Sobic.006G127200 kelch repeat protein, putative, expressed -
18 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
19 Sobic.001G347700 protein phosphotase protein, putative, expressed -
20 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial


Gene co-expression network
sample Sobic002G232400 Sobic002G232400 Sobic002G153000 Sobic002G153000 Sobic002G232400--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic002G232400--Sobic002G090500 Sobic001G352800 Sobic001G352800 Sobic002G232400--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic002G232400--Sobic001G192700 Sobic002G268700 Sobic002G268700 Sobic002G232400--Sobic002G268700 Sobic010G002800 Sobic010G002800 Sobic002G232400--Sobic010G002800 Sobic004G218600 Sobic004G218600 Sobic002G232400--Sobic004G218600 Sobic008G084100 Sobic008G084100 Sobic002G232400--Sobic008G084100 Sobic010G018500 Sobic010G018500 Sobic002G232400--Sobic010G018500 Sobic002G153000--Sobic002G090500 Sobic001G543400 Sobic001G543400 Sobic002G153000--Sobic001G543400 Sobic002G153000--Sobic004G218600 Sobic002G153000--Sobic002G232400 Sobic002G070300 Sobic002G070300 Sobic002G153000--Sobic002G070300 Sobic008G057900 Sobic008G057900 Sobic002G153000--Sobic008G057900 Sobic004G261800 Sobic004G261800 Sobic002G153000--Sobic004G261800 Sobic001G011000 Sobic001G011000 Sobic002G153000--Sobic001G011000 Sobic002G153000--Sobic001G352800 Sobic002G090500--Sobic002G153000 Sobic002G090500--Sobic002G232400 Sobic002G090500--Sobic001G352800 Sobic004G356300 Sobic004G356300 Sobic002G090500--Sobic004G356300 Sobic003G075200 Sobic003G075200 Sobic002G090500--Sobic003G075200 Sobic002G090500--Sobic004G218600 Sobic002G090500--Sobic001G011000 Sobic002G090500--Sobic001G543400 Sobic002G090500--Sobic008G057900 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic001G352800--Sobic002G232400 Sobic002G255400 Sobic002G255400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic001G352800--Sobic002G090500 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic001G192700--Sobic001G219800 Sobic003G016300 Sobic003G016300 Sobic001G192700--Sobic003G016300 Sobic001G192700--Sobic001G352800 Sobic001G192700--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic001G192700--Sobic001G135200 Sobic001G348000 Sobic001G348000 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic002G387800 Sobic002G387800 Sobic001G192700--Sobic002G387800 Sobic002G268700--Sobic002G232400 Sobic002G268700--Sobic001G348000 Sobic004G231200 Sobic004G231200 Sobic002G268700--Sobic004G231200 Sobic004G069400 Sobic004G069400 Sobic002G268700--Sobic004G069400 Sobic007G048700 Sobic007G048700 Sobic002G268700--Sobic007G048700 Sobic010G080900 Sobic010G080900 Sobic002G268700--Sobic010G080900 Sobic002G268700--Sobic002G070300 Sobic004G064600 Sobic004G064600 Sobic002G268700--Sobic004G064600 Sobic002G426100 Sobic002G426100 Sobic002G268700--Sobic002G426100 Sobic010G002800--Sobic001G352800 Sobic010G002800--Sobic003G085500 Sobic003G388700 Sobic003G388700 Sobic010G002800--Sobic003G388700 Sobic010G002800--Sobic002G232400 Sobic001G309200 Sobic001G309200 Sobic010G002800--Sobic001G309200 Sobic004G186100 Sobic004G186100 Sobic010G002800--Sobic004G186100 Sobic002G222200 Sobic002G222200 Sobic010G002800--Sobic002G222200 Sobic001G073600 Sobic001G073600 Sobic010G002800--Sobic001G073600 Sobic004G007700 Sobic004G007700 Sobic010G002800--Sobic004G007700 Sobic004G218600--Sobic002G153000 Sobic001G457000 Sobic001G457000 Sobic004G218600--Sobic001G457000 Sobic002G352200 Sobic002G352200 Sobic004G218600--Sobic002G352200 Sobic004G218600--Sobic001G543400 Sobic004G218600--Sobic003G260600 Sobic004G218600--Sobic002G070300 Sobic004G218600--Sobic002G255400 Sobic003G049200 Sobic003G049200 Sobic004G218600--Sobic003G049200 Sobic007G119600 Sobic007G119600 Sobic004G218600--Sobic007G119600 Sobic010G277000 Sobic010G277000 Sobic008G084100--Sobic010G277000 Sobic001G035400 Sobic001G035400 Sobic008G084100--Sobic001G035400 Sobic003G238500 Sobic003G238500 Sobic008G084100--Sobic003G238500 Sobic008G084100--Sobic001G073600 Sobic008G084100--Sobic007G048700 Sobic001G370700 Sobic001G370700 Sobic008G084100--Sobic001G370700 Sobic001G413100 Sobic001G413100 Sobic008G084100--Sobic001G413100 Sobic008G084100--Sobic002G232400 Sobic006G203900 Sobic006G203900 Sobic008G084100--Sobic006G203900 Sobic001G146000 Sobic001G146000 Sobic010G018500--Sobic001G146000 Sobic010G018500--Sobic002G232400 Sobic003G266400 Sobic003G266400 Sobic010G018500--Sobic003G266400 Sobic010G018500--Sobic001G543400 Sobic010G018500--Sobic008G084100 Sobic010G018500--Sobic002G153000 Sobic002G101300 Sobic002G101300 Sobic010G018500--Sobic002G101300 Sobic010G042600 Sobic010G042600 Sobic010G018500--Sobic010G042600 Sobic010G018500--Sobic004G356300
Octagon: transcription factors


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