Gene annotation
Transcriptome id Sobic.003G075200.1
Synonym Sb03g006350
Functional annotation mitochondrial glycoprotein, putative, expressed
UniProt C5XQ32
Pfam PF02330
Panther DB PTHR10826 PTHR10826:SF4
NCBI CDD KOG2536; MAM33, mitochondrial matrix glycoprotein
KEGG Orthology K15414; complement component 1 Q subcomponent-binding protein, mitochondrial
Gene Ontology GO:0005759; mitochondrial matrix


Orthologs (automatic annotation)
TAIR AT5G05990 : Mitochondrial glycoprotein family protein
RAP-DB (Rice) LOC_Os01g05010.1 : mitochondrial glycoprotein, putative, expressed
MaizeGDB (Corn) Zm00025a023487
Brachypodium -
Barley HORVU0Hr1G006190.2 , HORVU0Hr1G006190.3 , HORVU0Hr1G006190.1 , HORVU0Hr1G006190.4 , HORVU3Hr1G011460.1
Wheat TraesCS3A02G059200 , TraesCS3A02G059200 , TraesCS3B02G071700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G356300 expressed protein -
2 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
3 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
4 Sobic.010G188900 PPR repeat domain containing protein, putative, expressed -
5 Sobic.009G220000 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
6 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
7 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
8 Sobic.004G007700 pentatricopeptide, putative, expressed -
9 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
11 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
12 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
13 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
14 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
15 Sobic.001G219800 methyltransferase, putative, expressed -
16 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
17 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
18 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
19 Sobic.009G218000 VIP1 protein, putative, expressed -
20 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -


Gene co-expression network
sample Sobic003G075200 Sobic003G075200 Sobic004G356300 Sobic004G356300 Sobic003G075200--Sobic004G356300 Sobic001G352800 Sobic001G352800 Sobic003G075200--Sobic001G352800 Sobic008G057900 Sobic008G057900 Sobic003G075200--Sobic008G057900 Sobic010G188900 Sobic010G188900 Sobic003G075200--Sobic010G188900 Sobic009G220000 Sobic009G220000 Sobic003G075200--Sobic009G220000 Sobic002G153000 Sobic002G153000 Sobic003G075200--Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic003G075200--Sobic002G090500 Sobic004G007700 Sobic004G007700 Sobic003G075200--Sobic004G007700 Sobic006G153200 Sobic006G153200 Sobic003G075200--Sobic006G153200 Sobic004G356300--Sobic004G007700 Sobic001G011000 Sobic001G011000 Sobic004G356300--Sobic001G011000 Sobic004G356300--Sobic003G075200 Sobic002G367800 Sobic002G367800 Sobic004G356300--Sobic002G367800 Sobic004G356300--Sobic002G090500 Sobic004G356300--Sobic008G057900 Sobic001G176900 Sobic001G176900 Sobic004G356300--Sobic001G176900 Sobic010G134100 Sobic010G134100 Sobic004G356300--Sobic010G134100 Sobic002G071100 Sobic002G071100 Sobic004G356300--Sobic002G071100 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic002G232400 Sobic002G232400 Sobic001G352800--Sobic002G232400 Sobic002G255400 Sobic002G255400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic001G352800--Sobic002G090500 Sobic001G192700 Sobic001G192700 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic001G543400 Sobic001G543400 Sobic008G057900--Sobic001G543400 Sobic008G057900--Sobic002G153000 Sobic008G057900--Sobic003G075200 Sobic008G057900--Sobic001G011000 Sobic008G057900--Sobic004G356300 Sobic002G186300 Sobic002G186300 Sobic008G057900--Sobic002G186300 Sobic008G057900--Sobic002G367800 Sobic002G217500 Sobic002G217500 Sobic008G057900--Sobic002G217500 Sobic008G057900--Sobic002G090500 Sobic002G308000 Sobic002G308000 Sobic010G188900--Sobic002G308000 Sobic002G192900 Sobic002G192900 Sobic010G188900--Sobic002G192900 Sobic010G253200 Sobic010G253200 Sobic010G188900--Sobic010G253200 Sobic008G132200 Sobic008G132200 Sobic010G188900--Sobic008G132200 Sobic003G045000 Sobic003G045000 Sobic010G188900--Sobic003G045000 Sobic010G188900--Sobic003G075200 Sobic010G080900 Sobic010G080900 Sobic010G188900--Sobic010G080900 Sobic010G188900--Sobic001G352800 Sobic008G104000 Sobic008G104000 Sobic010G188900--Sobic008G104000 Sobic007G048700 Sobic007G048700 Sobic009G220000--Sobic007G048700 Sobic009G220000--Sobic003G075200 Sobic004G069400 Sobic004G069400 Sobic009G220000--Sobic004G069400 Sobic006G271000 Sobic006G271000 Sobic009G220000--Sobic006G271000 Sobic003G261100 Sobic003G261100 Sobic009G220000--Sobic003G261100 Sobic009G220000--Sobic004G356300 Sobic002G352200 Sobic002G352200 Sobic009G220000--Sobic002G352200 Sobic009G220000--Sobic004G007700 Sobic001G135200 Sobic001G135200 Sobic009G220000--Sobic001G135200 Sobic002G153000--Sobic002G090500 Sobic002G153000--Sobic001G543400 Sobic004G218600 Sobic004G218600 Sobic002G153000--Sobic004G218600 Sobic002G153000--Sobic002G232400 Sobic002G070300 Sobic002G070300 Sobic002G153000--Sobic002G070300 Sobic002G153000--Sobic008G057900 Sobic004G261800 Sobic004G261800 Sobic002G153000--Sobic004G261800 Sobic002G153000--Sobic001G011000 Sobic002G153000--Sobic001G352800 Sobic002G090500--Sobic002G153000 Sobic002G090500--Sobic002G232400 Sobic002G090500--Sobic001G352800 Sobic002G090500--Sobic004G356300 Sobic002G090500--Sobic003G075200 Sobic002G090500--Sobic004G218600 Sobic002G090500--Sobic001G011000 Sobic002G090500--Sobic001G543400 Sobic002G090500--Sobic008G057900 Sobic004G007700--Sobic004G356300 Sobic010G018900 Sobic010G018900 Sobic004G007700--Sobic010G018900 Sobic004G007700--Sobic001G011000 Sobic004G007700--Sobic003G075200 Sobic004G007700--Sobic002G367800 Sobic004G007700--Sobic010G080900 Sobic010G002800 Sobic010G002800 Sobic004G007700--Sobic010G002800 Sobic007G140100 Sobic007G140100 Sobic004G007700--Sobic007G140100 Sobic001G167500 Sobic001G167500 Sobic004G007700--Sobic001G167500 Sobic009G218000 Sobic009G218000 Sobic006G153200--Sobic009G218000 Sobic006G153200--Sobic002G217500 Sobic004G100100 Sobic004G100100 Sobic006G153200--Sobic004G100100 Sobic006G153200--Sobic003G075200 Sobic003G167000 Sobic003G167000 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic006G153200--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic006G153200--Sobic008G011800
Octagon: transcription factors


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