Gene annotation
Transcriptome id Sobic.008G057900.1
Synonym SAPX, Sb08g004880
Functional annotation OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed
UniProt C5YSU3
Pfam PF00141
Panther DB PTHR31356 PTHR31356:SF12
NCBI CDD -
KEGG Orthology K00434; L-ascorbate peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G08390 : stromal ascorbate peroxidase
RAP-DB (Rice) LOC_Os12g07820.1 : OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed
MaizeGDB (Corn) Zm00025a054066
Brachypodium KQJ92013
Barley HORVU5Hr1G037160.10 , HORVU5Hr1G037160.11 , HORVU5Hr1G037160.12 , HORVU5Hr1G037160.13 , HORVU5Hr1G037160.14 , HORVU5Hr1G037160.9 , HORVU7Hr1G071840.1 , HORVU7Hr1G071840.3 , HORVU7Hr1G071840.2 , HORVU3Hr1G110310.1 , HORVU5Hr1G037160.8 , HORVU5Hr1G037160.2 , HORVU5Hr1G037160.3 , HORVU5Hr1G037160.1 , HORVU5Hr1G037160.6 , HORVU5Hr1G037160.7 , HORVU5Hr1G037160.4 , HORVU5Hr1G037160.5
Wheat TraesCS5D02G127200 , TraesCS5D02G127200 , TraesCS5D02G127200 , TraesCS5B02G120200 , TraesCS5B02G120200 , TraesCS5B02G120200 , TraesCS5A02G113100 , TraesCS5A02G113100 , TraesCS5A02G113100
Populus -


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cDNA sequences
Sobic.008G057900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
2 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
3 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
4 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
5 Sobic.004G356300 expressed protein -
6 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
7 Sobic.002G367800 PPR repeat domain containing protein, putative, expressed -
8 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
9 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
10 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
11 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
12 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
13 Sobic.003G028200 expressed protein -
14 Sobic.002G070300 expressed protein -
15 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
16 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
17 Sobic.003G049200 NADH-cytochrome b5 reductase, putative, expressed K00326: cytochrome-b5 reductase
18 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
19 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
20 Sobic.003G238500 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase


Gene co-expression network
sample Sobic008G057900 Sobic008G057900 Sobic001G543400 Sobic001G543400 Sobic008G057900--Sobic001G543400 Sobic002G153000 Sobic002G153000 Sobic008G057900--Sobic002G153000 Sobic003G075200 Sobic003G075200 Sobic008G057900--Sobic003G075200 Sobic001G011000 Sobic001G011000 Sobic008G057900--Sobic001G011000 Sobic004G356300 Sobic004G356300 Sobic008G057900--Sobic004G356300 Sobic002G186300 Sobic002G186300 Sobic008G057900--Sobic002G186300 Sobic002G367800 Sobic002G367800 Sobic008G057900--Sobic002G367800 Sobic002G217500 Sobic002G217500 Sobic008G057900--Sobic002G217500 Sobic002G090500 Sobic002G090500 Sobic008G057900--Sobic002G090500 Sobic001G543400--Sobic002G153000 Sobic002G070300 Sobic002G070300 Sobic001G543400--Sobic002G070300 Sobic001G543400--Sobic008G057900 Sobic003G260600 Sobic003G260600 Sobic001G543400--Sobic003G260600 Sobic004G017900 Sobic004G017900 Sobic001G543400--Sobic004G017900 Sobic007G014700 Sobic007G014700 Sobic001G543400--Sobic007G014700 Sobic004G218600 Sobic004G218600 Sobic001G543400--Sobic004G218600 Sobic004G261800 Sobic004G261800 Sobic001G543400--Sobic004G261800 Sobic008G132200 Sobic008G132200 Sobic001G543400--Sobic008G132200 Sobic002G153000--Sobic002G090500 Sobic002G153000--Sobic001G543400 Sobic002G153000--Sobic004G218600 Sobic002G232400 Sobic002G232400 Sobic002G153000--Sobic002G232400 Sobic002G153000--Sobic002G070300 Sobic002G153000--Sobic008G057900 Sobic002G153000--Sobic004G261800 Sobic002G153000--Sobic001G011000 Sobic001G352800 Sobic001G352800 Sobic002G153000--Sobic001G352800 Sobic003G075200--Sobic004G356300 Sobic003G075200--Sobic001G352800 Sobic003G075200--Sobic008G057900 Sobic010G188900 Sobic010G188900 Sobic003G075200--Sobic010G188900 Sobic009G220000 Sobic009G220000 Sobic003G075200--Sobic009G220000 Sobic003G075200--Sobic002G153000 Sobic003G075200--Sobic002G090500 Sobic004G007700 Sobic004G007700 Sobic003G075200--Sobic004G007700 Sobic006G153200 Sobic006G153200 Sobic003G075200--Sobic006G153200 Sobic004G212100 Sobic004G212100 Sobic001G011000--Sobic004G212100 Sobic001G011000--Sobic002G367800 Sobic002G071100 Sobic002G071100 Sobic001G011000--Sobic002G071100 Sobic001G011000--Sobic004G356300 Sobic001G011000--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G011000--Sobic009G041800 Sobic002G281600 Sobic002G281600 Sobic001G011000--Sobic002G281600 Sobic001G011000--Sobic002G153000 Sobic001G011000--Sobic008G057900 Sobic004G356300--Sobic004G007700 Sobic004G356300--Sobic001G011000 Sobic004G356300--Sobic003G075200 Sobic004G356300--Sobic002G367800 Sobic004G356300--Sobic002G090500 Sobic004G356300--Sobic008G057900 Sobic001G176900 Sobic001G176900 Sobic004G356300--Sobic001G176900 Sobic010G134100 Sobic010G134100 Sobic004G356300--Sobic010G134100 Sobic004G356300--Sobic002G071100 Sobic001G458800 Sobic001G458800 Sobic002G186300--Sobic001G458800 Sobic003G034900 Sobic003G034900 Sobic002G186300--Sobic003G034900 Sobic007G119600 Sobic007G119600 Sobic002G186300--Sobic007G119600 Sobic004G297700 Sobic004G297700 Sobic002G186300--Sobic004G297700 Sobic004G244000 Sobic004G244000 Sobic002G186300--Sobic004G244000 Sobic001G115700 Sobic001G115700 Sobic002G186300--Sobic001G115700 Sobic009G224400 Sobic009G224400 Sobic002G186300--Sobic009G224400 Sobic001G457000 Sobic001G457000 Sobic002G186300--Sobic001G457000 Sobic002G186300--Sobic008G057900 Sobic002G367800--Sobic004G212100 Sobic002G367800--Sobic001G011000 Sobic003G388900 Sobic003G388900 Sobic002G367800--Sobic003G388900 Sobic002G367800--Sobic009G041800 Sobic001G522000 Sobic001G522000 Sobic002G367800--Sobic001G522000 Sobic002G367800--Sobic004G356300 Sobic001G214900 Sobic001G214900 Sobic002G367800--Sobic001G214900 Sobic002G367800--Sobic002G071100 Sobic002G367800--Sobic002G070300 Sobic003G016300 Sobic003G016300 Sobic002G217500--Sobic003G016300 Sobic002G352200 Sobic002G352200 Sobic002G217500--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G217500--Sobic002G255400 Sobic002G217500--Sobic006G153200 Sobic001G219800 Sobic001G219800 Sobic002G217500--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic002G217500--Sobic008G018300 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic009G218000 Sobic009G218000 Sobic002G217500--Sobic009G218000 Sobic002G090500--Sobic002G153000 Sobic002G090500--Sobic002G232400 Sobic002G090500--Sobic001G352800 Sobic002G090500--Sobic004G356300 Sobic002G090500--Sobic003G075200 Sobic002G090500--Sobic004G218600 Sobic002G090500--Sobic001G011000 Sobic002G090500--Sobic001G543400 Sobic002G090500--Sobic008G057900
Octagon: transcription factors


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