Gene annotation
Transcriptome id Sobic.002G153000.2,Sobic.002G153000.1
Synonym Sb02g018670
Functional annotation oxidoreductase domain protein, putative, expressed
UniProt A0A1W0W475 , C5X863
Pfam PF02894 PF01408
Panther DB PTHR22604 PTHR22604:SF111
NCBI CDD KOG2742; Predicted oxidoreductase
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G20790 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os09g10820.1 : oxidoreductase domain protein, putative, expressed
MaizeGDB (Corn) Zm00025a013293
Brachypodium PNT64281 , KQJ89664
Barley HORVU5Hr1G053300.8 , HORVU5Hr1G053300.9 , HORVU5Hr1G053300.4 , HORVU5Hr1G053300.5 , HORVU5Hr1G053300.6 , HORVU5Hr1G053300.7 , HORVU5Hr1G053300.1 , HORVU5Hr1G053300.2 , HORVU5Hr1G053300.3 , HORVU5Hr1G053300.10 , HORVU5Hr1G053300.11
Wheat TraesCS5D02G178500 , TraesCS5D02G178500 , TraesCS5B02G171500 , TraesCS5B02G171500 , TraesCS5B02G171500 , TraesCS5A02G174000 , TraesCS5A02G174000 , TraesCS5A02G174000
Populus -


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cDNA sequences
Sobic.002G153000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
2 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
3 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
4 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
5 Sobic.002G070300 expressed protein -
6 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
7 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
8 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
9 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
10 Sobic.003G159700 ATKINESIN-13A/KINESIN-13A, putative, expressed K10393: KIF2_24, kinesin family member 2/24
11 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
12 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
13 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
14 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
15 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
16 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
17 Sobic.010G253200 GHMP kinases ATP-binding protein, putative, expressed K12446: L-arabinokinase
18 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
19 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
20 Sobic.009G080600 expressed protein -


Gene co-expression network
sample Sobic002G153000 Sobic002G153000 Sobic002G090500 Sobic002G090500 Sobic002G153000--Sobic002G090500 Sobic001G543400 Sobic001G543400 Sobic002G153000--Sobic001G543400 Sobic004G218600 Sobic004G218600 Sobic002G153000--Sobic004G218600 Sobic002G232400 Sobic002G232400 Sobic002G153000--Sobic002G232400 Sobic002G070300 Sobic002G070300 Sobic002G153000--Sobic002G070300 Sobic008G057900 Sobic008G057900 Sobic002G153000--Sobic008G057900 Sobic004G261800 Sobic004G261800 Sobic002G153000--Sobic004G261800 Sobic001G011000 Sobic001G011000 Sobic002G153000--Sobic001G011000 Sobic001G352800 Sobic001G352800 Sobic002G153000--Sobic001G352800 Sobic002G090500--Sobic002G153000 Sobic002G090500--Sobic002G232400 Sobic002G090500--Sobic001G352800 Sobic004G356300 Sobic004G356300 Sobic002G090500--Sobic004G356300 Sobic003G075200 Sobic003G075200 Sobic002G090500--Sobic003G075200 Sobic002G090500--Sobic004G218600 Sobic002G090500--Sobic001G011000 Sobic002G090500--Sobic001G543400 Sobic002G090500--Sobic008G057900 Sobic001G543400--Sobic002G153000 Sobic001G543400--Sobic002G070300 Sobic001G543400--Sobic008G057900 Sobic003G260600 Sobic003G260600 Sobic001G543400--Sobic003G260600 Sobic004G017900 Sobic004G017900 Sobic001G543400--Sobic004G017900 Sobic007G014700 Sobic007G014700 Sobic001G543400--Sobic007G014700 Sobic001G543400--Sobic004G218600 Sobic001G543400--Sobic004G261800 Sobic008G132200 Sobic008G132200 Sobic001G543400--Sobic008G132200 Sobic004G218600--Sobic002G153000 Sobic001G457000 Sobic001G457000 Sobic004G218600--Sobic001G457000 Sobic002G352200 Sobic002G352200 Sobic004G218600--Sobic002G352200 Sobic004G218600--Sobic001G543400 Sobic004G218600--Sobic003G260600 Sobic004G218600--Sobic002G070300 Sobic002G255400 Sobic002G255400 Sobic004G218600--Sobic002G255400 Sobic003G049200 Sobic003G049200 Sobic004G218600--Sobic003G049200 Sobic007G119600 Sobic007G119600 Sobic004G218600--Sobic007G119600 Sobic002G232400--Sobic002G153000 Sobic002G232400--Sobic002G090500 Sobic002G232400--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic002G232400--Sobic001G192700 Sobic002G268700 Sobic002G268700 Sobic002G232400--Sobic002G268700 Sobic010G002800 Sobic010G002800 Sobic002G232400--Sobic010G002800 Sobic002G232400--Sobic004G218600 Sobic008G084100 Sobic008G084100 Sobic002G232400--Sobic008G084100 Sobic010G018500 Sobic010G018500 Sobic002G232400--Sobic010G018500 Sobic002G070300--Sobic008G132200 Sobic007G118500 Sobic007G118500 Sobic002G070300--Sobic007G118500 Sobic002G070300--Sobic001G543400 Sobic002G070300--Sobic003G260600 Sobic002G070300--Sobic001G011000 Sobic003G159700 Sobic003G159700 Sobic002G070300--Sobic003G159700 Sobic002G154800 Sobic002G154800 Sobic002G070300--Sobic002G154800 Sobic001G378800 Sobic001G378800 Sobic002G070300--Sobic001G378800 Sobic002G070300--Sobic002G153000 Sobic008G057900--Sobic001G543400 Sobic008G057900--Sobic002G153000 Sobic008G057900--Sobic003G075200 Sobic008G057900--Sobic001G011000 Sobic008G057900--Sobic004G356300 Sobic002G186300 Sobic002G186300 Sobic008G057900--Sobic002G186300 Sobic002G367800 Sobic002G367800 Sobic008G057900--Sobic002G367800 Sobic002G217500 Sobic002G217500 Sobic008G057900--Sobic002G217500 Sobic008G057900--Sobic002G090500 Sobic003G013700 Sobic003G013700 Sobic004G261800--Sobic003G013700 Sobic002G186200 Sobic002G186200 Sobic004G261800--Sobic002G186200 Sobic004G261800--Sobic007G014700 Sobic010G253200 Sobic010G253200 Sobic004G261800--Sobic010G253200 Sobic002G420100 Sobic002G420100 Sobic004G261800--Sobic002G420100 Sobic002G201700 Sobic002G201700 Sobic004G261800--Sobic002G201700 Sobic001G303900 Sobic001G303900 Sobic004G261800--Sobic001G303900 Sobic003G423700 Sobic003G423700 Sobic004G261800--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic004G261800--Sobic008G156600 Sobic004G212100 Sobic004G212100 Sobic001G011000--Sobic004G212100 Sobic001G011000--Sobic002G367800 Sobic002G071100 Sobic002G071100 Sobic001G011000--Sobic002G071100 Sobic001G011000--Sobic004G356300 Sobic001G011000--Sobic002G070300 Sobic009G041800 Sobic009G041800 Sobic001G011000--Sobic009G041800 Sobic002G281600 Sobic002G281600 Sobic001G011000--Sobic002G281600 Sobic001G011000--Sobic002G153000 Sobic001G011000--Sobic008G057900 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic001G352800--Sobic002G232400 Sobic001G352800--Sobic002G255400 Sobic001G352800--Sobic003G260600 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic001G352800--Sobic002G090500 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800
Octagon: transcription factors


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