Gene annotation
Transcriptome id Sobic.001G543400.1
Synonym Sb01g050570
Functional annotation phosphoglycerate mutase, putative, expressed
UniProt C5WNN7
Pfam PF00300
Panther DB PTHR16469
NCBI CDD KOG3734; Predicted phosphoglycerate mutase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G60450 : Phosphoglycerate mutase family protein
RAP-DB (Rice) LOC_Os03g01180.1 : phosphoglycerate mutase, putative, expressed
MaizeGDB (Corn) Zm00025a053614 , Zm00025a000084
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
2 Sobic.002G070300 expressed protein -
3 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
4 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
5 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
6 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
7 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
8 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
9 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
10 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
11 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
12 Sobic.003G028200 expressed protein -
13 Sobic.001G011000 elongation factor Tu, putative, expressed K02358: tuf, elongation factor Tu
14 Sobic.002G186200 ASC1, putative, expressed K04710: CERS1_2_3_4, ceramide synthetase
15 Sobic.002G090500 calreticulin precursor protein, putative, expressed K08057: calreticulin
16 Sobic.004G035400 PFT1, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
17 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
18 Sobic.002G186300 serine/threonine-protein kinase 16, putative, expressed K08856: serine/threonine kinase 16
19 Sobic.002G281600 protein of unknown function domain containing protein, expressed -
20 Sobic.010G018500 expressed protein -


Gene co-expression network
sample Sobic001G543400 Sobic001G543400 Sobic002G153000 Sobic002G153000 Sobic001G543400--Sobic002G153000 Sobic002G070300 Sobic002G070300 Sobic001G543400--Sobic002G070300 Sobic008G057900 Sobic008G057900 Sobic001G543400--Sobic008G057900 Sobic003G260600 Sobic003G260600 Sobic001G543400--Sobic003G260600 Sobic004G017900 Sobic004G017900 Sobic001G543400--Sobic004G017900 Sobic007G014700 Sobic007G014700 Sobic001G543400--Sobic007G014700 Sobic004G218600 Sobic004G218600 Sobic001G543400--Sobic004G218600 Sobic004G261800 Sobic004G261800 Sobic001G543400--Sobic004G261800 Sobic008G132200 Sobic008G132200 Sobic001G543400--Sobic008G132200 Sobic002G090500 Sobic002G090500 Sobic002G153000--Sobic002G090500 Sobic002G153000--Sobic001G543400 Sobic002G153000--Sobic004G218600 Sobic002G232400 Sobic002G232400 Sobic002G153000--Sobic002G232400 Sobic002G153000--Sobic002G070300 Sobic002G153000--Sobic008G057900 Sobic002G153000--Sobic004G261800 Sobic001G011000 Sobic001G011000 Sobic002G153000--Sobic001G011000 Sobic001G352800 Sobic001G352800 Sobic002G153000--Sobic001G352800 Sobic002G070300--Sobic008G132200 Sobic007G118500 Sobic007G118500 Sobic002G070300--Sobic007G118500 Sobic002G070300--Sobic001G543400 Sobic002G070300--Sobic003G260600 Sobic002G070300--Sobic001G011000 Sobic003G159700 Sobic003G159700 Sobic002G070300--Sobic003G159700 Sobic002G154800 Sobic002G154800 Sobic002G070300--Sobic002G154800 Sobic001G378800 Sobic001G378800 Sobic002G070300--Sobic001G378800 Sobic002G070300--Sobic002G153000 Sobic008G057900--Sobic001G543400 Sobic008G057900--Sobic002G153000 Sobic003G075200 Sobic003G075200 Sobic008G057900--Sobic003G075200 Sobic008G057900--Sobic001G011000 Sobic004G356300 Sobic004G356300 Sobic008G057900--Sobic004G356300 Sobic002G186300 Sobic002G186300 Sobic008G057900--Sobic002G186300 Sobic002G367800 Sobic002G367800 Sobic008G057900--Sobic002G367800 Sobic002G217500 Sobic002G217500 Sobic008G057900--Sobic002G217500 Sobic008G057900--Sobic002G090500 Sobic002G255400 Sobic002G255400 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G089100 Sobic003G089100 Sobic003G260600--Sobic003G089100 Sobic003G260600--Sobic008G132200 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic003G260600--Sobic007G014700 Sobic004G017900--Sobic003G260600 Sobic004G017900--Sobic001G543400 Sobic002G392400 Sobic002G392400 Sobic004G017900--Sobic002G392400 Sobic007G189100 Sobic007G189100 Sobic004G017900--Sobic007G189100 Sobic004G017900--Sobic008G132200 Sobic004G017900--Sobic007G014700 Sobic003G200000 Sobic003G200000 Sobic004G017900--Sobic003G200000 Sobic004G017900--Sobic002G070300 Sobic007G043700 Sobic007G043700 Sobic004G017900--Sobic007G043700 Sobic007G014700--Sobic004G261800 Sobic007G014700--Sobic002G255400 Sobic007G014700--Sobic003G089100 Sobic003G013700 Sobic003G013700 Sobic007G014700--Sobic003G013700 Sobic007G014700--Sobic003G260600 Sobic007G014700--Sobic002G420600 Sobic003G284100 Sobic003G284100 Sobic007G014700--Sobic003G284100 Sobic002G352200 Sobic002G352200 Sobic007G014700--Sobic002G352200 Sobic001G303900 Sobic001G303900 Sobic007G014700--Sobic001G303900 Sobic004G218600--Sobic002G153000 Sobic001G457000 Sobic001G457000 Sobic004G218600--Sobic001G457000 Sobic004G218600--Sobic002G352200 Sobic004G218600--Sobic001G543400 Sobic004G218600--Sobic003G260600 Sobic004G218600--Sobic002G070300 Sobic004G218600--Sobic002G255400 Sobic003G049200 Sobic003G049200 Sobic004G218600--Sobic003G049200 Sobic007G119600 Sobic007G119600 Sobic004G218600--Sobic007G119600 Sobic004G261800--Sobic003G013700 Sobic002G186200 Sobic002G186200 Sobic004G261800--Sobic002G186200 Sobic004G261800--Sobic007G014700 Sobic010G253200 Sobic010G253200 Sobic004G261800--Sobic010G253200 Sobic002G420100 Sobic002G420100 Sobic004G261800--Sobic002G420100 Sobic002G201700 Sobic002G201700 Sobic004G261800--Sobic002G201700 Sobic004G261800--Sobic001G303900 Sobic003G423700 Sobic003G423700 Sobic004G261800--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic004G261800--Sobic008G156600 Sobic008G132200--Sobic002G070300 Sobic008G132200--Sobic003G260600 Sobic008G132200--Sobic002G255400 Sobic008G132200--Sobic003G372200 Sobic001G385000 Sobic001G385000 Sobic008G132200--Sobic001G385000 Sobic002G167100 Sobic002G167100 Sobic008G132200--Sobic002G167100 Sobic008G132200--Sobic001G378800 Sobic006G232800 Sobic006G232800 Sobic008G132200--Sobic006G232800 Sobic008G132200--Sobic010G253200
Octagon: transcription factors


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