Gene annotation
Transcriptome id Sobic.004G232700.1
Synonym Sb04g027630
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
wound/stress protein, putative, expressed
UniProt C5XYN8
Pfam PF01477
Panther DB PTHR31718 PTHR31718:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G39730 : Lipase/lipooxygenase, PLAT/LH2 family protein
RAP-DB (Rice) LOC_Os02g51710.1 : wound/stress protein, putative, expressed
MaizeGDB (Corn) Zm00025a033168 , Zm00025a011142
Brachypodium KQK01860 , KQJ82935
Barley HORVU2Hr1G079840.1 , HORVU2Hr1G079840.2 , HORVU2Hr1G079840.3 , HORVU2Hr1G079840.4 , HORVU6Hr1G074940.1 , HORVU6Hr1G074940.2 , HORVU6Hr1G074940.3
Wheat TraesCS2B02G339800 , TraesCS6B02G330700 , TraesCS6D02G280900 , TraesCS2D02G319800 , TraesCS2A02G342100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
2 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
3 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
4 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
6 Sobic.004G251600 leaf senescence related protein, putative, expressed -
7 Sobic.004G173700 SLL1 protein, putative, expressed -
8 Sobic.004G261800 sugar-responsive gene(PubMedID : 25496467)@pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
9 Sobic.002G124900 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
10 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
11 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
12 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
13 Sobic.003G016300 SFT2, putative, expressed -
14 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
15 Sobic.003G028200 expressed protein -
16 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
17 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
18 Sobic.004G149100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
19 Sobic.008G057900 OsAPx6 - Stromal Ascorbate Peroxidase encoding gene 5,8, expressed K00434: L-ascorbate peroxidase
20 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -


Gene co-expression network
sample Sobic004G232700 Sobic004G232700 Sobic007G212100 Sobic007G212100 Sobic004G232700--Sobic007G212100 Sobic002G352200 Sobic002G352200 Sobic004G232700--Sobic002G352200 Sobic001G543400 Sobic001G543400 Sobic004G232700--Sobic001G543400 Sobic009G176400 Sobic009G176400 Sobic004G232700--Sobic009G176400 Sobic007G014700 Sobic007G014700 Sobic004G232700--Sobic007G014700 Sobic004G251600 Sobic004G251600 Sobic004G232700--Sobic004G251600 Sobic004G173700 Sobic004G173700 Sobic004G232700--Sobic004G173700 Sobic004G261800 Sobic004G261800 Sobic004G232700--Sobic004G261800 Sobic002G124900 Sobic002G124900 Sobic004G232700--Sobic002G124900 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic007G212100--Sobic003G137600 Sobic004G232500 Sobic004G232500 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic002G420600 Sobic002G420600 Sobic002G352200--Sobic002G420600 Sobic003G016300 Sobic003G016300 Sobic002G352200--Sobic003G016300 Sobic008G018300 Sobic008G018300 Sobic002G352200--Sobic008G018300 Sobic002G255400 Sobic002G255400 Sobic002G352200--Sobic002G255400 Sobic002G352200--Sobic004G173700 Sobic003G260600 Sobic003G260600 Sobic002G352200--Sobic003G260600 Sobic009G224400 Sobic009G224400 Sobic002G352200--Sobic009G224400 Sobic002G352200--Sobic002G124900 Sobic001G073600 Sobic001G073600 Sobic002G352200--Sobic001G073600 Sobic002G153000 Sobic002G153000 Sobic001G543400--Sobic002G153000 Sobic002G070300 Sobic002G070300 Sobic001G543400--Sobic002G070300 Sobic008G057900 Sobic008G057900 Sobic001G543400--Sobic008G057900 Sobic001G543400--Sobic003G260600 Sobic004G017900 Sobic004G017900 Sobic001G543400--Sobic004G017900 Sobic001G543400--Sobic007G014700 Sobic004G218600 Sobic004G218600 Sobic001G543400--Sobic004G218600 Sobic001G543400--Sobic004G261800 Sobic008G132200 Sobic008G132200 Sobic001G543400--Sobic008G132200 Sobic009G176400--Sobic007G212100 Sobic009G176400--Sobic004G173700 Sobic009G176400--Sobic004G247500 Sobic009G176400--Sobic003G137600 Sobic009G157800 Sobic009G157800 Sobic009G176400--Sobic009G157800 Sobic009G176400--Sobic004G232500 Sobic001G365700 Sobic001G365700 Sobic009G176400--Sobic001G365700 Sobic010G216400 Sobic010G216400 Sobic009G176400--Sobic010G216400 Sobic009G176400--Sobic004G232700 Sobic007G014700--Sobic004G261800 Sobic007G014700--Sobic002G255400 Sobic003G089100 Sobic003G089100 Sobic007G014700--Sobic003G089100 Sobic003G013700 Sobic003G013700 Sobic007G014700--Sobic003G013700 Sobic007G014700--Sobic003G260600 Sobic007G014700--Sobic002G420600 Sobic003G284100 Sobic003G284100 Sobic007G014700--Sobic003G284100 Sobic007G014700--Sobic002G352200 Sobic001G303900 Sobic001G303900 Sobic007G014700--Sobic001G303900 Sobic004G251600--Sobic010G250300 Sobic004G251600--Sobic004G232700 Sobic004G251600--Sobic007G212100 Sobic003G087700 Sobic003G087700 Sobic004G251600--Sobic003G087700 Sobic001G102100 Sobic001G102100 Sobic004G251600--Sobic001G102100 Sobic007G127400 Sobic007G127400 Sobic004G251600--Sobic007G127400 Sobic004G251600--Sobic009G176400 Sobic004G275800 Sobic004G275800 Sobic004G251600--Sobic004G275800 Sobic007G127500 Sobic007G127500 Sobic004G251600--Sobic007G127500 Sobic004G173700--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic004G173700--Sobic006G120900 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic004G173700--Sobic001G303900 Sobic004G173700--Sobic008G018300 Sobic004G261800--Sobic003G013700 Sobic002G186200 Sobic002G186200 Sobic004G261800--Sobic002G186200 Sobic004G261800--Sobic007G014700 Sobic010G253200 Sobic010G253200 Sobic004G261800--Sobic010G253200 Sobic002G420100 Sobic002G420100 Sobic004G261800--Sobic002G420100 Sobic002G201700 Sobic002G201700 Sobic004G261800--Sobic002G201700 Sobic004G261800--Sobic001G303900 Sobic003G423700 Sobic003G423700 Sobic004G261800--Sobic003G423700 Sobic008G156600 Sobic008G156600 Sobic004G261800--Sobic008G156600 Sobic002G124900--Sobic002G352200 Sobic002G124900--Sobic004G261800 Sobic010G231700 Sobic010G231700 Sobic002G124900--Sobic010G231700 Sobic002G124900--Sobic002G420600 Sobic002G124900--Sobic003G013700 Sobic002G124900--Sobic001G303900 Sobic002G124900--Sobic004G173700 Sobic002G124900--Sobic007G014700 Sobic002G124900--Sobic004G247500
Octagon: transcription factors


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