Gene annotation
Transcriptome id Sobic.002G111500.1
Synonym Sb02g009540, FATB
Functional annotation Fatty acyl-ACP thioesterases B FATB (At) (PubMedID : 27208977)
myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed
UniProt C5X490
Pfam PF01643
Panther DB PTHR31727 PTHR31727:SF4
NCBI CDD -
KEGG Orthology K10781; fatty acyl-ACP thioesterase B
Gene Ontology GO:0016790; thiolester hydrolase activity GO:0006633fatty acid biosynthetic process


Orthologs (automatic annotation)
TAIR AT1G08510 : fatty acyl-ACP thioesterases B
RAP-DB (Rice) LOC_Os11g43820.1 : myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a013303
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G266400 clathrin assembly protein, putative, expressed -
2 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
3 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
4 Sobic.010G018500 expressed protein -
5 Sobic.010G114000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
6 Sobic.002G271300 NC domain-containing protein, putative, expressed -
7 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
8 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
9 Sobic.001G543400 phosphoglycerate mutase, putative, expressed -
10 Sobic.001G146000 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
11 Sobic.004G149100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
12 Sobic.002G153000 oxidoreductase domain protein, putative, expressed -
13 Sobic.001G131600 expressed protein -
14 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
15 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
16 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
17 Sobic.006G035900 ribosomal protein, putative, expressed K02995: RP-S8e, small subunit ribosomal protein S8e
18 Sobic.002G063400 ADP-ribosylation factor, putative, expressed K07943: ADP-ribosylation factor-like protein 2
19 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
20 Sobic.003G261100 WD repeat-containing protein, putative, expressed K14753: guanine nucleotide-binding protein subunit beta-2-like 1 protein


Gene co-expression network
sample Sobic002G111500 Sobic002G111500 Sobic003G266400 Sobic003G266400 Sobic002G111500--Sobic003G266400 Sobic004G232700 Sobic004G232700 Sobic002G111500--Sobic004G232700 Sobic003G122200 Sobic003G122200 Sobic002G111500--Sobic003G122200 Sobic010G018500 Sobic010G018500 Sobic002G111500--Sobic010G018500 Sobic010G114000 Sobic010G114000 Sobic002G111500--Sobic010G114000 Sobic002G271300 Sobic002G271300 Sobic002G111500--Sobic002G271300 Sobic003G444200 Sobic003G444200 Sobic002G111500--Sobic003G444200 Sobic010G101600 Sobic010G101600 Sobic002G111500--Sobic010G101600 Sobic001G543400 Sobic001G543400 Sobic002G111500--Sobic001G543400 Sobic003G364900 Sobic003G364900 Sobic003G266400--Sobic003G364900 Sobic003G266400--Sobic010G018500 Sobic003G266400--Sobic002G111500 Sobic003G266400--Sobic001G543400 Sobic002G090500 Sobic002G090500 Sobic003G266400--Sobic002G090500 Sobic002G153000 Sobic002G153000 Sobic003G266400--Sobic002G153000 Sobic002G232400 Sobic002G232400 Sobic003G266400--Sobic002G232400 Sobic010G042600 Sobic010G042600 Sobic003G266400--Sobic010G042600 Sobic001G146000 Sobic001G146000 Sobic003G266400--Sobic001G146000 Sobic007G212100 Sobic007G212100 Sobic004G232700--Sobic007G212100 Sobic002G352200 Sobic002G352200 Sobic004G232700--Sobic002G352200 Sobic004G232700--Sobic001G543400 Sobic009G176400 Sobic009G176400 Sobic004G232700--Sobic009G176400 Sobic007G014700 Sobic007G014700 Sobic004G232700--Sobic007G014700 Sobic004G251600 Sobic004G251600 Sobic004G232700--Sobic004G251600 Sobic004G173700 Sobic004G173700 Sobic004G232700--Sobic004G173700 Sobic004G261800 Sobic004G261800 Sobic004G232700--Sobic004G261800 Sobic002G124900 Sobic002G124900 Sobic004G232700--Sobic002G124900 Sobic001G475500 Sobic001G475500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic007G150800 Sobic007G150800 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic010G264300 Sobic010G264300 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic010G018500--Sobic001G146000 Sobic010G018500--Sobic002G232400 Sobic010G018500--Sobic003G266400 Sobic010G018500--Sobic001G543400 Sobic008G084100 Sobic008G084100 Sobic010G018500--Sobic008G084100 Sobic010G018500--Sobic002G153000 Sobic002G101300 Sobic002G101300 Sobic010G018500--Sobic002G101300 Sobic010G018500--Sobic010G042600 Sobic004G356300 Sobic004G356300 Sobic010G018500--Sobic004G356300 Sobic010G096100 Sobic010G096100 Sobic010G114000--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic010G114000--Sobic006G075000 Sobic010G114000--Sobic002G271300 Sobic010G131400 Sobic010G131400 Sobic010G114000--Sobic010G131400 Sobic002G254900 Sobic002G254900 Sobic010G114000--Sobic002G254900 Sobic010G114000--Sobic002G111500 Sobic010G180100 Sobic010G180100 Sobic010G114000--Sobic010G180100 Sobic010G114000--Sobic010G042600 Sobic004G165300 Sobic004G165300 Sobic010G114000--Sobic004G165300 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic002G271300--Sobic010G114000 Sobic006G102900 Sobic006G102900 Sobic003G444200--Sobic006G102900 Sobic001G401600 Sobic001G401600 Sobic003G444200--Sobic001G401600 Sobic009G189200 Sobic009G189200 Sobic003G444200--Sobic009G189200 Sobic003G444200--Sobic010G101600 Sobic010G089500 Sobic010G089500 Sobic003G444200--Sobic010G089500 Sobic003G444200--Sobic002G232400 Sobic003G444200--Sobic002G271300 Sobic003G444200--Sobic008G084100 Sobic003G444200--Sobic002G111500 Sobic010G101600--Sobic010G089500 Sobic004G056400 Sobic004G056400 Sobic010G101600--Sobic004G056400 Sobic003G096000 Sobic003G096000 Sobic010G101600--Sobic003G096000 Sobic009G111400 Sobic009G111400 Sobic010G101600--Sobic009G111400 Sobic001G370700 Sobic001G370700 Sobic010G101600--Sobic001G370700 Sobic001G073600 Sobic001G073600 Sobic010G101600--Sobic001G073600 Sobic009G244900 Sobic009G244900 Sobic010G101600--Sobic009G244900 Sobic003G261100 Sobic003G261100 Sobic010G101600--Sobic003G261100 Sobic010G101600--Sobic002G186900 Sobic001G543400--Sobic002G153000 Sobic002G070300 Sobic002G070300 Sobic001G543400--Sobic002G070300 Sobic008G057900 Sobic008G057900 Sobic001G543400--Sobic008G057900 Sobic003G260600 Sobic003G260600 Sobic001G543400--Sobic003G260600 Sobic004G017900 Sobic004G017900 Sobic001G543400--Sobic004G017900 Sobic001G543400--Sobic007G014700 Sobic004G218600 Sobic004G218600 Sobic001G543400--Sobic004G218600 Sobic001G543400--Sobic004G261800 Sobic008G132200 Sobic008G132200 Sobic001G543400--Sobic008G132200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.