Gene annotation
Transcriptome id Sobic.002G063400.1
Synonym TTN5, ARL2, ATARLC1, HAL
Functional annotation ADP-ribosylation factor, putative, expressed
UniProt C5XBV6
Pfam PF00025
Panther DB PTHR11711 PTHR11711:SF26
NCBI CDD KOG0072; GTP-binding ADP-ribosylation factor-like protein ARL1 KOG0074GTP-binding ADP-ribosylation factor-like protein ARL3 KOG0070GTP-binding ADP-ribosylation factor Arf1
KEGG Orthology K07943; ADP-ribosylation factor-like protein 2
Gene Ontology GO:0005525; GTP binding


Orthologs (automatic annotation)
TAIR AT2G18390 : ADP-ribosylation factor family protein
RAP-DB (Rice) LOC_Os02g22140.1 : ADP-ribosylation factor, putative, expressed
MaizeGDB (Corn) Zm00025a007508
Brachypodium KQJ85670
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G120500 expressed protein -
2 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
3 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
4 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
5 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
6 Sobic.002G308300 expressed protein -
7 Sobic.001G501600 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
9 Sobic.008G051800 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
10 Sobic.001G347901 - -
11 Sobic.009G215300 fiber protein Fb11, putative, expressed -
12 Sobic.004G183200 expressed protein -
13 Sobic.003G351000 60S ribosomal protein L36-2, putative, expressed K02920: RP-L36e, large subunit ribosomal protein L36e
14 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
15 Sobic.010G101600 pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed K00895: pfp, diphosphate-dependent phosphofructokinase
16 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
17 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
18 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
19 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
20 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10


Gene co-expression network
sample Sobic002G063400 Sobic002G063400 Sobic005G120500 Sobic005G120500 Sobic002G063400--Sobic005G120500 Sobic001G370700 Sobic001G370700 Sobic002G063400--Sobic001G370700 Sobic003G122200 Sobic003G122200 Sobic002G063400--Sobic003G122200 Sobic010G264300 Sobic010G264300 Sobic002G063400--Sobic010G264300 Sobic002G111500 Sobic002G111500 Sobic002G063400--Sobic002G111500 Sobic002G308300 Sobic002G308300 Sobic002G063400--Sobic002G308300 Sobic001G501600 Sobic001G501600 Sobic002G063400--Sobic001G501600 Sobic002G180300 Sobic002G180300 Sobic002G063400--Sobic002G180300 Sobic008G051800 Sobic008G051800 Sobic002G063400--Sobic008G051800 Sobic005G080900 Sobic005G080900 Sobic005G120500--Sobic005G080900 Sobic010G265900 Sobic010G265900 Sobic005G120500--Sobic010G265900 Sobic009G216800 Sobic009G216800 Sobic005G120500--Sobic009G216800 Sobic008G102800 Sobic008G102800 Sobic005G120500--Sobic008G102800 Sobic007G150800 Sobic007G150800 Sobic005G120500--Sobic007G150800 Sobic009G173500 Sobic009G173500 Sobic005G120500--Sobic009G173500 Sobic005G120500--Sobic003G122200 Sobic001G347901 Sobic001G347901 Sobic005G120500--Sobic001G347901 Sobic001G157800 Sobic001G157800 Sobic005G120500--Sobic001G157800 Sobic001G370700--Sobic010G264300 Sobic002G309700 Sobic002G309700 Sobic001G370700--Sobic002G309700 Sobic001G370700--Sobic002G308300 Sobic001G370700--Sobic002G180300 Sobic002G078300 Sobic002G078300 Sobic001G370700--Sobic002G078300 Sobic001G370700--Sobic001G347901 Sobic003G261100 Sobic003G261100 Sobic001G370700--Sobic003G261100 Sobic009G179100 Sobic009G179100 Sobic001G370700--Sobic009G179100 Sobic004G260200 Sobic004G260200 Sobic001G370700--Sobic004G260200 Sobic001G475500 Sobic001G475500 Sobic003G122200--Sobic001G475500 Sobic001G418100 Sobic001G418100 Sobic003G122200--Sobic001G418100 Sobic003G122200--Sobic007G150800 Sobic005G112800 Sobic005G112800 Sobic003G122200--Sobic005G112800 Sobic003G034600 Sobic003G034600 Sobic003G122200--Sobic003G034600 Sobic003G122200--Sobic010G264300 Sobic001G038300 Sobic001G038300 Sobic003G122200--Sobic001G038300 Sobic004G055700 Sobic004G055700 Sobic003G122200--Sobic004G055700 Sobic001G040100 Sobic001G040100 Sobic003G122200--Sobic001G040100 Sobic001G286200 Sobic001G286200 Sobic010G264300--Sobic001G286200 Sobic010G264300--Sobic002G078300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic002G356400 Sobic002G356400 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic010G264300--Sobic001G370700 Sobic001G304400 Sobic001G304400 Sobic010G264300--Sobic001G304400 Sobic010G264300--Sobic002G180300 Sobic003G266400 Sobic003G266400 Sobic002G111500--Sobic003G266400 Sobic004G232700 Sobic004G232700 Sobic002G111500--Sobic004G232700 Sobic002G111500--Sobic003G122200 Sobic010G018500 Sobic010G018500 Sobic002G111500--Sobic010G018500 Sobic010G114000 Sobic010G114000 Sobic002G111500--Sobic010G114000 Sobic002G271300 Sobic002G271300 Sobic002G111500--Sobic002G271300 Sobic003G444200 Sobic003G444200 Sobic002G111500--Sobic003G444200 Sobic010G101600 Sobic010G101600 Sobic002G111500--Sobic010G101600 Sobic001G543400 Sobic001G543400 Sobic002G111500--Sobic001G543400 Sobic002G308300--Sobic001G286200 Sobic002G308300--Sobic010G264300 Sobic002G308300--Sobic001G347901 Sobic009G016500 Sobic009G016500 Sobic002G308300--Sobic009G016500 Sobic002G308300--Sobic002G309700 Sobic001G282500 Sobic001G282500 Sobic002G308300--Sobic001G282500 Sobic002G308300--Sobic001G370700 Sobic002G308300--Sobic002G180300 Sobic002G308300--Sobic002G078300 Sobic001G501600--Sobic001G370700 Sobic006G013000 Sobic006G013000 Sobic001G501600--Sobic006G013000 Sobic007G161700 Sobic007G161700 Sobic001G501600--Sobic007G161700 Sobic001G501600--Sobic003G261100 Sobic001G501600--Sobic002G180300 Sobic007G134900 Sobic007G134900 Sobic001G501600--Sobic007G134900 Sobic002G296200 Sobic002G296200 Sobic001G501600--Sobic002G296200 Sobic004G056400 Sobic004G056400 Sobic001G501600--Sobic004G056400 Sobic010G089500 Sobic010G089500 Sobic001G501600--Sobic010G089500 Sobic002G180300--Sobic002G309700 Sobic002G180300--Sobic006G013000 Sobic002G180300--Sobic002G356400 Sobic002G180300--Sobic009G179100 Sobic009G115700 Sobic009G115700 Sobic002G180300--Sobic009G115700 Sobic002G180300--Sobic010G264300 Sobic001G404800 Sobic001G404800 Sobic002G180300--Sobic001G404800 Sobic002G180300--Sobic001G370700 Sobic002G180300--Sobic002G308300 Sobic008G051800--Sobic001G286200 Sobic007G211500 Sobic007G211500 Sobic008G051800--Sobic007G211500 Sobic008G051800--Sobic004G260200 Sobic008G051800--Sobic002G296200 Sobic008G051800--Sobic002G309700 Sobic008G051800--Sobic001G282500 Sobic008G051800--Sobic002G356400 Sobic004G060500 Sobic004G060500 Sobic008G051800--Sobic004G060500 Sobic008G051800--Sobic010G264300
Octagon: transcription factors


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