Gene annotation
Transcriptome id Sobic.001G347901.1
Synonym -
Functional annotation -
UniProt A0A1Z5S9G9
Pfam PF01907
Panther DB PTHR10768
NCBI CDD KOG3475; 60S ribosomal protein L37
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G16080 : Zinc-binding ribosomal protein family protein
RAP-DB (Rice) LOC_Os02g02130.1 : ribosomal protein L37, putative, expressed
MaizeGDB (Corn) Zm00025a018679 , Zm00025a032820
Brachypodium KQK01327 , KQJ92862
Barley HORVU6Hr1G005390.3 , HORVU6Hr1G005390.2 , HORVU6Hr1G005390.1 , HORVU6Hr1G090070.1 , HORVU6Hr1G090070.2 , HORVU2Hr1G002240.2 , HORVU2Hr1G002240.3
Wheat TraesCS6D02G033200 , TraesCS6B02G041500 , TraesCS6A02G386000 , TraesCS6B02G425000
Populus PNT43777


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G342400 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e
2 Sobic.002G308300 expressed protein -
3 Sobic.009G016500 expressed protein -
4 Sobic.009G179100 ribosomal protein L7Ae, putative, expressed K02908: RP-L30e, large subunit ribosomal protein L30e
5 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
6 Sobic.009G233400 60S ribosomal protein L18a, putative, expressed K02882: RP-L18Ae, large subunit ribosomal protein L18Ae
7 Sobic.002G415500 60S ribosomal protein L18-3, putative, expressed K02883: RP-L18e, large subunit ribosomal protein L18e
8 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
9 Sobic.001G334300 - K02966: RP-S19e, small subunit ribosomal protein S19e
10 Sobic.002G331300 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
11 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
12 Sobic.001G162800 expressed protein -
13 Sobic.010G023900 S10/S20 domain containing ribosomal protein, putative, expressed K02969: RP-S20e, small subunit ribosomal protein S20e
14 Sobic.008G135000 60S ribosomal protein L8, putative, expressed K02938: RP-L8e, large subunit ribosomal protein L8e
15 Sobic.010G005300 ribosomal protein L6, putative, expressed K02940: RP-L9e, large subunit ribosomal protein L9e
16 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
17 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
18 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
19 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
20 Sobic.009G115700 40S ribosomal protein S4, putative, expressed K02987: RP-S4e, small subunit ribosomal protein S4e


Gene co-expression network
sample Sobic001G347901 Sobic001G347901 Sobic004G342400 Sobic004G342400 Sobic001G347901--Sobic004G342400 Sobic002G308300 Sobic002G308300 Sobic001G347901--Sobic002G308300 Sobic009G016500 Sobic009G016500 Sobic001G347901--Sobic009G016500 Sobic009G179100 Sobic009G179100 Sobic001G347901--Sobic009G179100 Sobic001G370700 Sobic001G370700 Sobic001G347901--Sobic001G370700 Sobic009G233400 Sobic009G233400 Sobic001G347901--Sobic009G233400 Sobic002G415500 Sobic002G415500 Sobic001G347901--Sobic002G415500 Sobic009G173500 Sobic009G173500 Sobic001G347901--Sobic009G173500 Sobic001G334300 Sobic001G334300 Sobic001G347901--Sobic001G334300 Sobic010G023900 Sobic010G023900 Sobic004G342400--Sobic010G023900 Sobic004G342400--Sobic009G179100 Sobic004G342400--Sobic001G334300 Sobic009G144300 Sobic009G144300 Sobic004G342400--Sobic009G144300 Sobic009G101700 Sobic009G101700 Sobic004G342400--Sobic009G101700 Sobic004G342400--Sobic009G233400 Sobic002G304900 Sobic002G304900 Sobic004G342400--Sobic002G304900 Sobic003G387900 Sobic003G387900 Sobic004G342400--Sobic003G387900 Sobic004G342400--Sobic009G173500 Sobic001G286200 Sobic001G286200 Sobic002G308300--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic002G308300--Sobic010G264300 Sobic002G308300--Sobic001G347901 Sobic002G308300--Sobic009G016500 Sobic002G309700 Sobic002G309700 Sobic002G308300--Sobic002G309700 Sobic001G282500 Sobic001G282500 Sobic002G308300--Sobic001G282500 Sobic002G308300--Sobic001G370700 Sobic002G180300 Sobic002G180300 Sobic002G308300--Sobic002G180300 Sobic002G078300 Sobic002G078300 Sobic002G308300--Sobic002G078300 Sobic009G016500--Sobic001G347901 Sobic009G016500--Sobic002G308300 Sobic009G016500--Sobic001G286200 Sobic001G473400 Sobic001G473400 Sobic009G016500--Sobic001G473400 Sobic009G016500--Sobic001G370700 Sobic009G016500--Sobic010G264300 Sobic010G258000 Sobic010G258000 Sobic009G016500--Sobic010G258000 Sobic009G016500--Sobic002G078300 Sobic008G136800 Sobic008G136800 Sobic009G016500--Sobic008G136800 Sobic009G179100--Sobic002G304900 Sobic009G179100--Sobic009G101700 Sobic009G179100--Sobic004G342400 Sobic009G179100--Sobic001G334300 Sobic005G050500 Sobic005G050500 Sobic009G179100--Sobic005G050500 Sobic009G179100--Sobic009G233400 Sobic009G179100--Sobic003G387900 Sobic001G039400 Sobic001G039400 Sobic009G179100--Sobic001G039400 Sobic009G179100--Sobic009G173500 Sobic001G370700--Sobic010G264300 Sobic001G370700--Sobic002G309700 Sobic001G370700--Sobic002G308300 Sobic001G370700--Sobic002G180300 Sobic001G370700--Sobic002G078300 Sobic001G370700--Sobic001G347901 Sobic003G261100 Sobic003G261100 Sobic001G370700--Sobic003G261100 Sobic001G370700--Sobic009G179100 Sobic004G260200 Sobic004G260200 Sobic001G370700--Sobic004G260200 Sobic009G233400--Sobic001G334300 Sobic009G233400--Sobic002G304900 Sobic010G069400 Sobic010G069400 Sobic009G233400--Sobic010G069400 Sobic009G233400--Sobic001G039400 Sobic009G233400--Sobic005G050500 Sobic001G058900 Sobic001G058900 Sobic009G233400--Sobic001G058900 Sobic003G249700 Sobic003G249700 Sobic009G233400--Sobic003G249700 Sobic003G109600 Sobic003G109600 Sobic009G233400--Sobic003G109600 Sobic001G085400 Sobic001G085400 Sobic009G233400--Sobic001G085400 Sobic009G115700 Sobic009G115700 Sobic002G415500--Sobic009G115700 Sobic002G415500--Sobic001G334300 Sobic002G415500--Sobic009G233400 Sobic007G019400 Sobic007G019400 Sobic002G415500--Sobic007G019400 Sobic002G415500--Sobic002G304900 Sobic002G415500--Sobic001G058900 Sobic009G076400 Sobic009G076400 Sobic002G415500--Sobic009G076400 Sobic009G227400 Sobic009G227400 Sobic002G415500--Sobic009G227400 Sobic002G415500--Sobic001G039400 Sobic009G173500--Sobic001G039400 Sobic001G226500 Sobic001G226500 Sobic009G173500--Sobic001G226500 Sobic009G173500--Sobic009G233400 Sobic009G223300 Sobic009G223300 Sobic009G173500--Sobic009G223300 Sobic009G173500--Sobic003G109600 Sobic003G078200 Sobic003G078200 Sobic009G173500--Sobic003G078200 Sobic009G173500--Sobic003G249700 Sobic009G173500--Sobic009G179100 Sobic010G070500 Sobic010G070500 Sobic009G173500--Sobic010G070500 Sobic001G334300--Sobic009G233400 Sobic001G334300--Sobic002G304900 Sobic001G334300--Sobic003G387900 Sobic001G334300--Sobic009G144300 Sobic001G334300--Sobic001G085400 Sobic001G334300--Sobic009G179100 Sobic001G334300--Sobic009G227400 Sobic001G334300--Sobic005G050500 Sobic002G049300 Sobic002G049300 Sobic001G334300--Sobic002G049300
Octagon: transcription factors


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