Gene annotation
Transcriptome id Sobic.001G286200.1
Synonym Sb01g028100
Functional annotation expressed protein
UniProt C5WQR1
Pfam PF10249
Panther DB PTHR13094 PTHR13094:SF1
NCBI CDD -
KEGG Orthology K03966; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G18410 : Complex I subunit NDUFS6
RAP-DB (Rice) LOC_Os10g42540.1 : expressed protein
MaizeGDB (Corn) Zm00025a003506 , Zm00025a018069
Brachypodium KQJ97965
Barley HORVU1Hr1G050740.1 , HORVU1Hr1G050740.3 , HORVU1Hr1G050740.2 , HORVU1Hr1G050740.5 , HORVU1Hr1G050740.4 , HORVU1Hr1G050740.7 , HORVU1Hr1G050740.6
Wheat TraesCS1D02G197900 , TraesCS1B02G209000 , TraesCS1A02G194000
Populus -


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cDNA sequences
Sobic.001G286200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G078300 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
2 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
3 Sobic.001G304400 expressed protein -
4 Sobic.007G211500 expressed protein -
5 Sobic.002G296200 expressed protein -
6 Sobic.007G134900 expressed protein -
7 Sobic.009G212200 expressed protein -
8 Sobic.002G308300 expressed protein -
9 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
10 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
11 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
12 Sobic.001G095632 - -
13 Sobic.008G051800 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
14 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
15 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
16 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
17 Sobic.009G016500 expressed protein -
18 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
19 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
20 Sobic.001G510800 ribosomal protein, putative, expressed K02894: RP-L23e, large subunit ribosomal protein L23e


Gene co-expression network
sample Sobic001G286200 Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic001G286200--Sobic002G078300 Sobic010G264300 Sobic010G264300 Sobic001G286200--Sobic010G264300 Sobic001G304400 Sobic001G304400 Sobic001G286200--Sobic001G304400 Sobic007G211500 Sobic007G211500 Sobic001G286200--Sobic007G211500 Sobic002G296200 Sobic002G296200 Sobic001G286200--Sobic002G296200 Sobic007G134900 Sobic007G134900 Sobic001G286200--Sobic007G134900 Sobic009G212200 Sobic009G212200 Sobic001G286200--Sobic009G212200 Sobic002G308300 Sobic002G308300 Sobic001G286200--Sobic002G308300 Sobic002G263100 Sobic002G263100 Sobic001G286200--Sobic002G263100 Sobic002G078300--Sobic001G286200 Sobic002G078300--Sobic010G264300 Sobic004G260200 Sobic004G260200 Sobic002G078300--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic002G078300--Sobic002G395000 Sobic002G309700 Sobic002G309700 Sobic002G078300--Sobic002G309700 Sobic002G078300--Sobic007G211500 Sobic002G356400 Sobic002G356400 Sobic002G078300--Sobic002G356400 Sobic001G370700 Sobic001G370700 Sobic002G078300--Sobic001G370700 Sobic002G078300--Sobic002G308300 Sobic010G264300--Sobic001G286200 Sobic010G264300--Sobic002G078300 Sobic010G264300--Sobic002G308300 Sobic001G519000 Sobic001G519000 Sobic010G264300--Sobic001G519000 Sobic010G264300--Sobic002G356400 Sobic010G264300--Sobic009G212200 Sobic010G264300--Sobic001G370700 Sobic010G264300--Sobic001G304400 Sobic002G180300 Sobic002G180300 Sobic010G264300--Sobic002G180300 Sobic003G443300 Sobic003G443300 Sobic001G304400--Sobic003G443300 Sobic001G432000 Sobic001G432000 Sobic001G304400--Sobic001G432000 Sobic001G304400--Sobic001G286200 Sobic003G249700 Sobic003G249700 Sobic001G304400--Sobic003G249700 Sobic001G304400--Sobic009G212200 Sobic007G019400 Sobic007G019400 Sobic001G304400--Sobic007G019400 Sobic002G304900 Sobic002G304900 Sobic001G304400--Sobic002G304900 Sobic003G150000 Sobic003G150000 Sobic001G304400--Sobic003G150000 Sobic009G062000 Sobic009G062000 Sobic001G304400--Sobic009G062000 Sobic007G211500--Sobic001G286200 Sobic007G211500--Sobic002G078300 Sobic002G246200 Sobic002G246200 Sobic007G211500--Sobic002G246200 Sobic007G211500--Sobic002G263100 Sobic008G051800 Sobic008G051800 Sobic007G211500--Sobic008G051800 Sobic004G183200 Sobic004G183200 Sobic007G211500--Sobic004G183200 Sobic007G211500--Sobic001G519000 Sobic007G211500--Sobic010G264300 Sobic007G211500--Sobic002G308300 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic007G134900--Sobic002G296200 Sobic007G134900--Sobic002G263100 Sobic007G134900--Sobic001G519000 Sobic007G134900--Sobic001G047800 Sobic007G134900--Sobic003G215700 Sobic009G223300 Sobic009G223300 Sobic007G134900--Sobic009G223300 Sobic007G134900--Sobic001G286200 Sobic007G134900--Sobic002G309700 Sobic009G173500 Sobic009G173500 Sobic007G134900--Sobic009G173500 Sobic009G212200--Sobic001G286200 Sobic009G212200--Sobic003G215700 Sobic009G212200--Sobic001G304400 Sobic009G212200--Sobic003G443300 Sobic009G212200--Sobic002G356400 Sobic009G212200--Sobic010G264300 Sobic009G212200--Sobic001G134400 Sobic009G212200--Sobic003G249700 Sobic009G076400 Sobic009G076400 Sobic009G212200--Sobic009G076400 Sobic002G308300--Sobic001G286200 Sobic002G308300--Sobic010G264300 Sobic001G347901 Sobic001G347901 Sobic002G308300--Sobic001G347901 Sobic009G016500 Sobic009G016500 Sobic002G308300--Sobic009G016500 Sobic002G308300--Sobic002G309700 Sobic001G282500 Sobic001G282500 Sobic002G308300--Sobic001G282500 Sobic002G308300--Sobic001G370700 Sobic002G308300--Sobic002G180300 Sobic002G308300--Sobic002G078300 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic003G296800 Sobic003G296800 Sobic002G263100--Sobic003G296800 Sobic002G263100--Sobic003G215700 Sobic002G263100--Sobic001G286200 Sobic001G404800 Sobic001G404800 Sobic002G263100--Sobic001G404800
Octagon: transcription factors


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