Gene annotation
Transcriptome id Sobic.001G519000.1
Synonym Sb01g048410
Functional annotation expressed protein
UniProt C5WZX4
Pfam PF05676
Panther DB PTHR20900 PTHR20900:SF0
NCBI CDD KOG3468; NADH:ubiquinone oxidoreductase, NDUFB7/B18 subunit
KEGG Orthology K03963; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
Gene Ontology GO:0008137; NADH dehydrogenase (ubiquinone) activity GO:0005739mitochondrion GO:0003954NADH dehydrogenase activity


Orthologs (automatic annotation)
TAIR AT2G02050 : NADH-ubiquinone oxidoreductase B18 subunit, putative
RAP-DB (Rice) LOC_Os03g03770.1 : expressed protein
MaizeGDB (Corn) Zm00025a000414
Brachypodium KQK23836
Barley HORVU4Hr1G082570.1
Wheat -
Populus -


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cDNA sequences
Sobic.001G519000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G134900 expressed protein -
2 Sobic.004G060500 fiber protein Fb15, putative, expressed -
3 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
4 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
5 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
6 Sobic.010G264300 LYR motif containing protein, putative, expressed K03965: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 9
7 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
8 Sobic.002G296200 expressed protein -
9 Sobic.009G173500 40S ribosomal protein S26, putative, expressed K02976: RP-S26e, small subunit ribosomal protein S26e
10 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
11 Sobic.004G183200 expressed protein -
12 Sobic.001G508900 60S ribosomal protein L21-2, putative, expressed K02889: RP-L21e, large subunit ribosomal protein L21e
13 Sobic.006G083500 SLL1 protein, putative, expressed -
14 Sobic.010G059300 cytochrome b-c1 complex subunit 8, putative, expressed -
15 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
16 Sobic.004G055100 60S ribosomal protein, putative, expressed K02900: RP-L27Ae, large subunit ribosomal protein L27Ae
17 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
18 Sobic.001G134400 CHCH domain containing protein, expressed -
19 Sobic.009G212200 expressed protein -
20 Sobic.003G296800 expressed protein -


Gene co-expression network
sample Sobic001G519000 Sobic001G519000 Sobic007G134900 Sobic007G134900 Sobic001G519000--Sobic007G134900 Sobic004G060500 Sobic004G060500 Sobic001G519000--Sobic004G060500 Sobic003G215700 Sobic003G215700 Sobic001G519000--Sobic003G215700 Sobic001G047800 Sobic001G047800 Sobic001G519000--Sobic001G047800 Sobic002G263100 Sobic002G263100 Sobic001G519000--Sobic002G263100 Sobic010G264300 Sobic010G264300 Sobic001G519000--Sobic010G264300 Sobic002G309700 Sobic002G309700 Sobic001G519000--Sobic002G309700 Sobic002G296200 Sobic002G296200 Sobic001G519000--Sobic002G296200 Sobic009G173500 Sobic009G173500 Sobic001G519000--Sobic009G173500 Sobic007G134900--Sobic002G296200 Sobic007G134900--Sobic002G263100 Sobic007G134900--Sobic001G519000 Sobic007G134900--Sobic001G047800 Sobic007G134900--Sobic003G215700 Sobic009G223300 Sobic009G223300 Sobic007G134900--Sobic009G223300 Sobic001G286200 Sobic001G286200 Sobic007G134900--Sobic001G286200 Sobic007G134900--Sobic002G309700 Sobic007G134900--Sobic009G173500 Sobic004G060500--Sobic003G215700 Sobic009G176000 Sobic009G176000 Sobic004G060500--Sobic009G176000 Sobic004G060500--Sobic001G519000 Sobic004G060500--Sobic001G047800 Sobic006G083500 Sobic006G083500 Sobic004G060500--Sobic006G083500 Sobic002G418400 Sobic002G418400 Sobic004G060500--Sobic002G418400 Sobic004G060500--Sobic002G309700 Sobic004G060500--Sobic002G296200 Sobic010G059300 Sobic010G059300 Sobic004G060500--Sobic010G059300 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G209000 Sobic003G209000 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic001G404800 Sobic001G404800 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic001G134400 Sobic001G134400 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic003G296800 Sobic003G296800 Sobic002G263100--Sobic003G296800 Sobic002G263100--Sobic003G215700 Sobic002G263100--Sobic001G286200 Sobic002G263100--Sobic001G404800 Sobic010G264300--Sobic001G286200 Sobic002G078300 Sobic002G078300 Sobic010G264300--Sobic002G078300 Sobic002G308300 Sobic002G308300 Sobic010G264300--Sobic002G308300 Sobic010G264300--Sobic001G519000 Sobic002G356400 Sobic002G356400 Sobic010G264300--Sobic002G356400 Sobic009G212200 Sobic009G212200 Sobic010G264300--Sobic009G212200 Sobic001G370700 Sobic001G370700 Sobic010G264300--Sobic001G370700 Sobic001G304400 Sobic001G304400 Sobic010G264300--Sobic001G304400 Sobic002G180300 Sobic002G180300 Sobic010G264300--Sobic002G180300 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic002G296200--Sobic001G074700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic002G296200--Sobic001G134400 Sobic002G296200--Sobic001G047800 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic001G039400 Sobic001G039400 Sobic009G173500--Sobic001G039400 Sobic001G226500 Sobic001G226500 Sobic009G173500--Sobic001G226500 Sobic009G233400 Sobic009G233400 Sobic009G173500--Sobic009G233400 Sobic009G173500--Sobic009G223300 Sobic003G109600 Sobic003G109600 Sobic009G173500--Sobic003G109600 Sobic003G078200 Sobic003G078200 Sobic009G173500--Sobic003G078200 Sobic003G249700 Sobic003G249700 Sobic009G173500--Sobic003G249700 Sobic009G179100 Sobic009G179100 Sobic009G173500--Sobic009G179100 Sobic010G070500 Sobic010G070500 Sobic009G173500--Sobic010G070500
Octagon: transcription factors


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