Gene annotation
Transcriptome id Sobic.001G047800.1,Sobic.001G047800.2
Synonym Sb01g004390
Functional annotation cytochrome b-c1 complex subunit 7, putative, expressed
UniProt A0A1B6QHB6 , A0A1B6QHB2
Pfam PF02271
Panther DB PTHR12022
NCBI CDD KOG3440; Ubiquinol cytochrome c reductase, subunit QCR7
KEGG Orthology K00417; QCR7, ubiquinol-cytochrome c reductase subunit 7
Gene Ontology GO:0006122; mitochondrial electron transport, ubiquinol to cytochrome c GO:0005750mitochondrial respiratory chain complex III


Orthologs (automatic annotation)
TAIR AT5G25450 : Cytochrome bd ubiquinol oxidase, 14kDa subunit
RAP-DB (Rice) LOC_Os07g10500.1,LOC_Os03g59220.1 : cytochrome b-c1 complex subunit 7, putative, expressed
MaizeGDB (Corn) Zm00025a013257 , Zm00025a008651
Brachypodium KQK12590 , KQK20413
Barley HORVU5Hr1G109620.2 , HORVU5Hr1G109620.1
Wheat TraesCS5A02G456800
Populus -


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cDNA sequences
Sobic.001G047800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
2 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
3 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
4 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
5 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
6 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
7 Sobic.004G060500 fiber protein Fb15, putative, expressed -
8 Sobic.007G134900 expressed protein -
9 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
10 Sobic.006G083500 SLL1 protein, putative, expressed -
11 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
12 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
13 Sobic.009G215300 fiber protein Fb11, putative, expressed -
14 Sobic.002G296200 expressed protein -
15 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
16 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
17 Sobic.003G296800 expressed protein -
18 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
19 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
20 Sobic.001G465800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2


Gene co-expression network
sample Sobic001G047800 Sobic001G047800 Sobic002G309700 Sobic002G309700 Sobic001G047800--Sobic002G309700 Sobic003G215700 Sobic003G215700 Sobic001G047800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G404800 Sobic001G404800 Sobic001G047800--Sobic001G404800 Sobic002G263100 Sobic002G263100 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G519000 Sobic001G519000 Sobic001G047800--Sobic001G519000 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic006G083500 Sobic006G083500 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G209000 Sobic003G209000 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic001G134400 Sobic001G134400 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G398901 Sobic002G398901 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic004G260200--Sobic001G465800 Sobic002G395000 Sobic002G395000 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700 Sobic001G404800--Sobic003G209000 Sobic001G404800--Sobic004G259200 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic001G404800--Sobic002G418400 Sobic001G404800--Sobic002G356400 Sobic001G404800--Sobic002G309700 Sobic001G404800--Sobic006G083500 Sobic001G404800--Sobic004G260200 Sobic002G263100--Sobic007G134900 Sobic002G263100--Sobic001G047800 Sobic002G263100--Sobic002G309700 Sobic002G263100--Sobic001G519000 Sobic002G263100--Sobic004G260200 Sobic003G296800 Sobic003G296800 Sobic002G263100--Sobic003G296800 Sobic002G263100--Sobic003G215700 Sobic001G286200 Sobic001G286200 Sobic002G263100--Sobic001G286200 Sobic002G263100--Sobic001G404800 Sobic004G060500--Sobic003G215700 Sobic009G176000 Sobic009G176000 Sobic004G060500--Sobic009G176000 Sobic004G060500--Sobic001G519000 Sobic004G060500--Sobic001G047800 Sobic004G060500--Sobic006G083500 Sobic004G060500--Sobic002G418400 Sobic004G060500--Sobic002G309700 Sobic004G060500--Sobic002G296200 Sobic010G059300 Sobic010G059300 Sobic004G060500--Sobic010G059300 Sobic007G134900--Sobic002G296200 Sobic007G134900--Sobic002G263100 Sobic007G134900--Sobic001G519000 Sobic007G134900--Sobic001G047800 Sobic007G134900--Sobic003G215700 Sobic009G223300 Sobic009G223300 Sobic007G134900--Sobic009G223300 Sobic007G134900--Sobic001G286200 Sobic007G134900--Sobic002G309700 Sobic009G173500 Sobic009G173500 Sobic007G134900--Sobic009G173500 Sobic001G519000--Sobic007G134900 Sobic001G519000--Sobic004G060500 Sobic001G519000--Sobic003G215700 Sobic001G519000--Sobic001G047800 Sobic001G519000--Sobic002G263100 Sobic010G264300 Sobic010G264300 Sobic001G519000--Sobic010G264300 Sobic001G519000--Sobic002G309700 Sobic001G519000--Sobic002G296200 Sobic001G519000--Sobic009G173500
Octagon: transcription factors


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