Gene annotation
Transcriptome id Sobic.002G296200.1
Synonym Sb02g032740
Functional annotation expressed protein
UniProt C5X8D8
Pfam -
Panther DB PTHR34286
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00585 : -
RAP-DB (Rice) LOC_Os09g38740.1 : expressed protein
MaizeGDB (Corn) Zm00025a014561 , Zm00025a047877
Brachypodium -
Barley HORVU0Hr1G013700.1 , HORVU5Hr1G089380.1
Wheat TraesCS5B02G366000
Populus PNT03621 , PNT03620 , PNT49876 , PNT49877


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cDNA sequences
Sobic.002G296200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
2 Sobic.007G134900 expressed protein -
3 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
4 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
5 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
6 Sobic.001G134400 CHCH domain containing protein, expressed -
7 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
8 Sobic.001G286200 expressed protein K03966: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 10
9 Sobic.003G129800 keratinocytes-associated protein 2, putative, expressed -
10 Sobic.004G060500 fiber protein Fb15, putative, expressed -
11 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
12 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
13 Sobic.009G232900 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
14 Sobic.007G134000 14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
15 Sobic.003G155400 miro, putative, expressed K07953: GTP-binding protein SAR1
16 Sobic.001G286300 - -
17 Sobic.007G161700 expressed protein K17769: mitochondrial import receptor subunit TOM22
18 Sobic.001G519000 expressed protein K03963: NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7
19 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
20 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -


Gene co-expression network
sample Sobic002G296200 Sobic002G296200 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic007G134900 Sobic007G134900 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G309700 Sobic002G309700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic006G013000--Sobic002G296200 Sobic006G013000--Sobic002G309700 Sobic006G013000--Sobic001G074700 Sobic002G180300 Sobic002G180300 Sobic006G013000--Sobic002G180300 Sobic006G013000--Sobic001G047800 Sobic007G013900 Sobic007G013900 Sobic006G013000--Sobic007G013900 Sobic006G013000--Sobic007G134900 Sobic001G404800 Sobic001G404800 Sobic006G013000--Sobic001G404800 Sobic009G215300 Sobic009G215300 Sobic006G013000--Sobic009G215300 Sobic007G134900--Sobic002G296200 Sobic002G263100 Sobic002G263100 Sobic007G134900--Sobic002G263100 Sobic001G519000 Sobic001G519000 Sobic007G134900--Sobic001G519000 Sobic007G134900--Sobic001G047800 Sobic007G134900--Sobic003G215700 Sobic009G223300 Sobic009G223300 Sobic007G134900--Sobic009G223300 Sobic007G134900--Sobic001G286200 Sobic007G134900--Sobic002G309700 Sobic009G173500 Sobic009G173500 Sobic007G134900--Sobic009G173500 Sobic004G170400 Sobic004G170400 Sobic001G074700--Sobic004G170400 Sobic001G350600 Sobic001G350600 Sobic001G074700--Sobic001G350600 Sobic004G259200 Sobic004G259200 Sobic001G074700--Sobic004G259200 Sobic001G074700--Sobic002G309700 Sobic010G154700 Sobic010G154700 Sobic001G074700--Sobic010G154700 Sobic001G074700--Sobic002G296200 Sobic009G119900 Sobic009G119900 Sobic001G074700--Sobic009G119900 Sobic001G074700--Sobic001G047800 Sobic002G418400 Sobic002G418400 Sobic001G074700--Sobic002G418400 Sobic006G083500 Sobic006G083500 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G209000 Sobic003G209000 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic003G215700--Sobic001G404800 Sobic004G060500 Sobic004G060500 Sobic003G215700--Sobic004G060500 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic004G260200 Sobic004G260200 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic002G309700--Sobic001G074700 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic002G309700--Sobic003G215700 Sobic001G134400--Sobic006G083500 Sobic001G134400--Sobic003G215700 Sobic009G176000 Sobic009G176000 Sobic001G134400--Sobic009G176000 Sobic007G053300 Sobic007G053300 Sobic001G134400--Sobic007G053300 Sobic001G134400--Sobic002G296200 Sobic001G134400--Sobic004G211833 Sobic001G134400--Sobic001G074700 Sobic007G134000 Sobic007G134000 Sobic001G134400--Sobic007G134000 Sobic001G134400--Sobic010G012500 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic002G078300 Sobic002G078300 Sobic001G286200--Sobic002G078300 Sobic010G264300 Sobic010G264300 Sobic001G286200--Sobic010G264300 Sobic001G304400 Sobic001G304400 Sobic001G286200--Sobic001G304400 Sobic007G211500 Sobic007G211500 Sobic001G286200--Sobic007G211500 Sobic001G286200--Sobic002G296200 Sobic001G286200--Sobic007G134900 Sobic009G212200 Sobic009G212200 Sobic001G286200--Sobic009G212200 Sobic002G308300 Sobic002G308300 Sobic001G286200--Sobic002G308300 Sobic001G286200--Sobic002G263100 Sobic001G128400 Sobic001G128400 Sobic003G129800--Sobic001G128400 Sobic005G111100 Sobic005G111100 Sobic003G129800--Sobic005G111100 Sobic002G304900 Sobic002G304900 Sobic003G129800--Sobic002G304900 Sobic003G249700 Sobic003G249700 Sobic003G129800--Sobic003G249700 Sobic001G058900 Sobic001G058900 Sobic003G129800--Sobic001G058900 Sobic001G513500 Sobic001G513500 Sobic003G129800--Sobic001G513500 Sobic003G129800--Sobic009G223300 Sobic004G066800 Sobic004G066800 Sobic003G129800--Sobic004G066800 Sobic005G050500 Sobic005G050500 Sobic003G129800--Sobic005G050500
Octagon: transcription factors


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