Gene annotation
Transcriptome id Sobic.002G309700.1
Synonym Sb02g033950
Functional annotation ATP synthase delta chain, mitochondrial precursor, putative, expressed
UniProt C5X9A1
Pfam PF02823
Panther DB PTHR13822 PTHR13822:SF7
NCBI CDD KOG1758; Mitochondrial F1F0-ATP synthase, subunit delta/ATP16
KEGG Orthology K02134; ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
Gene Ontology GO:0015986; ATP synthesis coupled proton transport


Orthologs (automatic annotation)
TAIR AT5G47030 : ATPase, F1 complex, delta/epsilon subunit
RAP-DB (Rice) LOC_Os07g31300.1 : ATP synthase delta chain, mitochondrial precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014727 , Zm00025a048127
Brachypodium -
Barley HORVU2Hr1G052880.2 , HORVU2Hr1G052880.1
Wheat TraesCS2A02G245200 , TraesCS2B02G253200 , TraesCS2D02G242100
Populus -


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cDNA sequences
Sobic.002G309700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
2 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
3 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
4 Sobic.009G215300 fiber protein Fb11, putative, expressed -
5 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
6 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
7 Sobic.002G296200 expressed protein -
8 Sobic.001G465800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
9 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
10 Sobic.002G263100 ferredoxin 1-like isoform 1, putative, expressed -
11 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
12 Sobic.002G180300 isochorismate synthase 1, chloroplast precursor, putative, expressed K15040: voltage-dependent anion channel protein 2
13 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
14 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
15 Sobic.004G060500 fiber protein Fb15, putative, expressed -
16 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
17 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
18 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
19 Sobic.007G134900 expressed protein -
20 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -


Gene co-expression network
sample Sobic002G309700 Sobic002G309700 Sobic004G260200 Sobic004G260200 Sobic002G309700--Sobic004G260200 Sobic001G047800 Sobic001G047800 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic009G215300 Sobic009G215300 Sobic002G309700--Sobic009G215300 Sobic001G404800 Sobic001G404800 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic003G215700 Sobic003G215700 Sobic002G309700--Sobic003G215700 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic004G260200--Sobic001G465800 Sobic002G395000 Sobic002G395000 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic002G418400 Sobic002G418400 Sobic001G047800--Sobic002G418400 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G519000 Sobic001G519000 Sobic001G047800--Sobic001G519000 Sobic002G356400--Sobic002G309700 Sobic002G356400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic002G356400--Sobic009G119900 Sobic001G350600 Sobic001G350600 Sobic002G356400--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic002G356400--Sobic004G170400 Sobic002G356400--Sobic004G260200 Sobic002G356400--Sobic001G404800 Sobic004G259200 Sobic004G259200 Sobic002G356400--Sobic004G259200 Sobic003G209000 Sobic003G209000 Sobic002G356400--Sobic003G209000 Sobic009G215300--Sobic002G309700 Sobic001G181500 Sobic001G181500 Sobic009G215300--Sobic001G181500 Sobic009G215300--Sobic001G047800 Sobic009G215300--Sobic004G260200 Sobic009G211900 Sobic009G211900 Sobic009G215300--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic009G215300--Sobic007G013900 Sobic001G282500 Sobic001G282500 Sobic009G215300--Sobic001G282500 Sobic003G135600 Sobic003G135600 Sobic009G215300--Sobic003G135600 Sobic009G215300--Sobic001G404800 Sobic001G404800--Sobic003G209000 Sobic001G404800--Sobic004G259200 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic001G404800--Sobic002G418400 Sobic001G404800--Sobic002G356400 Sobic001G404800--Sobic002G309700 Sobic006G083500 Sobic006G083500 Sobic001G404800--Sobic006G083500 Sobic001G404800--Sobic004G260200 Sobic001G074700--Sobic004G170400 Sobic001G074700--Sobic001G350600 Sobic001G074700--Sobic004G259200 Sobic001G074700--Sobic002G309700 Sobic010G154700 Sobic010G154700 Sobic001G074700--Sobic010G154700 Sobic001G074700--Sobic002G296200 Sobic001G074700--Sobic009G119900 Sobic001G074700--Sobic001G047800 Sobic001G074700--Sobic002G418400 Sobic006G013000 Sobic006G013000 Sobic002G296200--Sobic006G013000 Sobic002G296200--Sobic007G134900 Sobic002G296200--Sobic001G074700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic001G465800--Sobic002G356400 Sobic001G465800--Sobic004G259200 Sobic001G465800--Sobic004G260200 Sobic001G465800--Sobic004G170400 Sobic001G465800--Sobic001G350600 Sobic001G465800--Sobic002G309700 Sobic001G465800--Sobic001G074700 Sobic001G465800--Sobic001G404800 Sobic001G465800--Sobic001G047800 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500
Octagon: transcription factors


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