Gene annotation
Transcriptome id Sobic.001G282500.1,Sobic.001G282500.2
Synonym Sb01g027790
Functional annotation NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed
UniProt A0A1B6QLK4 , A0A1B6QLK3
Pfam PF05071
Panther DB PTHR12910 PTHR12910:SF2
NCBI CDD KOG3382; NADH:ubiquinone oxidoreductase, B17.2 subunit
KEGG Orthology K11352; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
Gene Ontology GO:0016020; membrane GO:0009055electron transfer activity GO:0008137NADH dehydrogenase (ubiquinone) activity


Orthologs (automatic annotation)
TAIR AT3G03100 : NADH:ubiquinone oxidoreductase, 17.2kDa subunit
RAP-DB (Rice) LOC_Os10g42840.1 : NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed
MaizeGDB (Corn) Zm00025a003571 , Zm00025a018083
Brachypodium KQJ97995
Barley HORVU1Hr1G051280.1 , HORVU1Hr1G051280.2
Wheat TraesCS1B02G211900 , TraesCS1D02G200800 , TraesCS1D02G200800 , TraesCS1B02G211900 , TraesCS1A02G197300
Populus -


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cDNA sequences
Sobic.001G282500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
2 Sobic.009G215300 fiber protein Fb11, putative, expressed -
3 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
4 Sobic.002G356400 NADH dehydrogenase iron-sulfur protein 4, mitochondrial precursor, putative, expressed K03937: NADH dehydrogenase (ubiquinone) Fe-S protein 4
5 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
6 Sobic.002G308300 expressed protein -
7 Sobic.001G181500 expressed protein -
8 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
9 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
10 Sobic.007G159700 expressed protein K02138: ATPeF0D, ATP5H, F-type H+-transporting ATPase subunit d
11 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
12 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
13 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
14 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
15 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
16 Sobic.004G202100 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
17 Sobic.003G124300 peroxiredoxin, putative, expressed -
18 Sobic.008G051800 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
19 Sobic.004G155100 uncharacterized protein MJ0304, putative, expressed -
20 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8


Gene co-expression network
sample Sobic001G282500 Sobic001G282500 Sobic002G309700 Sobic002G309700 Sobic001G282500--Sobic002G309700 Sobic009G215300 Sobic009G215300 Sobic001G282500--Sobic009G215300 Sobic004G260200 Sobic004G260200 Sobic001G282500--Sobic004G260200 Sobic002G356400 Sobic002G356400 Sobic001G282500--Sobic002G356400 Sobic002G395000 Sobic002G395000 Sobic001G282500--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G282500--Sobic002G308300 Sobic001G181500 Sobic001G181500 Sobic001G282500--Sobic001G181500 Sobic003G135600 Sobic003G135600 Sobic001G282500--Sobic003G135600 Sobic001G350600 Sobic001G350600 Sobic001G282500--Sobic001G350600 Sobic002G309700--Sobic004G260200 Sobic001G047800 Sobic001G047800 Sobic002G309700--Sobic001G047800 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic001G404800 Sobic001G404800 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic003G215700 Sobic003G215700 Sobic002G309700--Sobic003G215700 Sobic009G215300--Sobic002G309700 Sobic009G215300--Sobic001G181500 Sobic009G215300--Sobic001G047800 Sobic009G215300--Sobic004G260200 Sobic009G211900 Sobic009G211900 Sobic009G215300--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic009G215300--Sobic007G013900 Sobic009G215300--Sobic001G282500 Sobic009G215300--Sobic003G135600 Sobic009G215300--Sobic001G404800 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700 Sobic002G356400--Sobic002G309700 Sobic002G356400--Sobic001G465800 Sobic009G119900 Sobic009G119900 Sobic002G356400--Sobic009G119900 Sobic002G356400--Sobic001G350600 Sobic004G170400 Sobic004G170400 Sobic002G356400--Sobic004G170400 Sobic002G356400--Sobic004G260200 Sobic002G356400--Sobic001G404800 Sobic004G259200 Sobic004G259200 Sobic002G356400--Sobic004G259200 Sobic003G209000 Sobic003G209000 Sobic002G356400--Sobic003G209000 Sobic002G395000--Sobic004G260200 Sobic002G395000--Sobic003G135600 Sobic009G224400 Sobic009G224400 Sobic002G395000--Sobic009G224400 Sobic003G238500 Sobic003G238500 Sobic002G395000--Sobic003G238500 Sobic002G395000--Sobic002G309700 Sobic001G073600 Sobic001G073600 Sobic002G395000--Sobic001G073600 Sobic004G155100 Sobic004G155100 Sobic002G395000--Sobic004G155100 Sobic007G023400 Sobic007G023400 Sobic002G395000--Sobic007G023400 Sobic002G078300 Sobic002G078300 Sobic002G395000--Sobic002G078300 Sobic001G286200 Sobic001G286200 Sobic002G308300--Sobic001G286200 Sobic010G264300 Sobic010G264300 Sobic002G308300--Sobic010G264300 Sobic001G347901 Sobic001G347901 Sobic002G308300--Sobic001G347901 Sobic009G016500 Sobic009G016500 Sobic002G308300--Sobic009G016500 Sobic002G308300--Sobic002G309700 Sobic002G308300--Sobic001G282500 Sobic001G370700 Sobic001G370700 Sobic002G308300--Sobic001G370700 Sobic002G180300 Sobic002G180300 Sobic002G308300--Sobic002G180300 Sobic002G308300--Sobic002G078300 Sobic001G181500--Sobic009G215300 Sobic001G181500--Sobic009G211900 Sobic001G181500--Sobic003G135600 Sobic001G181500--Sobic002G309700 Sobic001G206700 Sobic001G206700 Sobic001G181500--Sobic001G206700 Sobic004G030000 Sobic004G030000 Sobic001G181500--Sobic004G030000 Sobic001G181500--Sobic001G282500 Sobic007G012900 Sobic007G012900 Sobic001G181500--Sobic007G012900 Sobic001G181500--Sobic004G260200 Sobic003G135600--Sobic004G155100 Sobic003G135600--Sobic002G395000 Sobic003G135600--Sobic001G073600 Sobic003G135600--Sobic009G224400 Sobic003G135600--Sobic002G309700 Sobic009G191400 Sobic009G191400 Sobic003G135600--Sobic009G191400 Sobic003G135600--Sobic001G181500 Sobic003G135600--Sobic009G211900 Sobic003G135600--Sobic004G260200 Sobic001G350600--Sobic004G170400 Sobic001G350600--Sobic004G259200 Sobic001G350600--Sobic002G356400 Sobic001G350600--Sobic001G074700 Sobic001G350600--Sobic001G465800 Sobic001G350600--Sobic003G209000 Sobic001G350600--Sobic001G404800 Sobic001G350600--Sobic009G119900 Sobic001G350600--Sobic004G030000
Octagon: transcription factors


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