Gene annotation
Transcriptome id Sobic.001G181500.2
Synonym Sb01g015780
Functional annotation expressed protein
UniProt A0A1Z5S6L1
Pfam -
Panther DB PTHR35292 PTHR35292:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20820 : -
RAP-DB (Rice) LOC_Os03g38520.1 : expressed protein
MaizeGDB (Corn) Zm00025a007108 , Zm00025a017357
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G181500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G215300 fiber protein Fb11, putative, expressed -
2 Sobic.009G211900 expressed protein -
3 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
4 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
5 Sobic.001G206700 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
6 Sobic.004G030000 mitochondrial ATP synthase precursor, putative, expressed -
7 Sobic.001G282500 NADH dehydrogenase 1 alpha subcomplex subunit 12, putative, expressed K11352: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12
8 Sobic.007G012900 50S ribosomal protein L19, chloroplast precursor, putative, expressed -
9 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
10 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
11 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
12 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
13 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
14 Sobic.001G350600 cytochrome c oxidase subunit, putative, expressed K02267: cytochrome c oxidase subunit 6b
15 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
16 Sobic.001G074700 cytochrome c oxidase-related, putative, expressed K02266: cytochrome c oxidase subunit 6a
17 Sobic.001G286300 - -
18 Sobic.009G191400 NADH dehydrogenase flavoprotein 2, mitochondrial precursor, putative, expressed K03943: NADH dehydrogenase (ubiquinone) flavoprotein 2
19 Sobic.002G246800 acetyltransferase, GNAT family, putative, expressed K00621: GNPNAT1, glucosamine-phosphate N-acetyltransferase
20 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30


Gene co-expression network
sample Sobic001G181500 Sobic001G181500 Sobic009G215300 Sobic009G215300 Sobic001G181500--Sobic009G215300 Sobic009G211900 Sobic009G211900 Sobic001G181500--Sobic009G211900 Sobic003G135600 Sobic003G135600 Sobic001G181500--Sobic003G135600 Sobic002G309700 Sobic002G309700 Sobic001G181500--Sobic002G309700 Sobic001G206700 Sobic001G206700 Sobic001G181500--Sobic001G206700 Sobic004G030000 Sobic004G030000 Sobic001G181500--Sobic004G030000 Sobic001G282500 Sobic001G282500 Sobic001G181500--Sobic001G282500 Sobic007G012900 Sobic007G012900 Sobic001G181500--Sobic007G012900 Sobic004G260200 Sobic004G260200 Sobic001G181500--Sobic004G260200 Sobic009G215300--Sobic002G309700 Sobic009G215300--Sobic001G181500 Sobic001G047800 Sobic001G047800 Sobic009G215300--Sobic001G047800 Sobic009G215300--Sobic004G260200 Sobic009G215300--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic009G215300--Sobic007G013900 Sobic009G215300--Sobic001G282500 Sobic009G215300--Sobic003G135600 Sobic001G404800 Sobic001G404800 Sobic009G215300--Sobic001G404800 Sobic009G211900--Sobic009G215300 Sobic006G124300 Sobic006G124300 Sobic009G211900--Sobic006G124300 Sobic009G211900--Sobic001G181500 Sobic006G203900 Sobic006G203900 Sobic009G211900--Sobic006G203900 Sobic009G211900--Sobic003G135600 Sobic009G211900--Sobic002G309700 Sobic008G136800 Sobic008G136800 Sobic009G211900--Sobic008G136800 Sobic001G073600 Sobic001G073600 Sobic009G211900--Sobic001G073600 Sobic009G211900--Sobic004G260200 Sobic004G155100 Sobic004G155100 Sobic003G135600--Sobic004G155100 Sobic002G395000 Sobic002G395000 Sobic003G135600--Sobic002G395000 Sobic003G135600--Sobic001G073600 Sobic009G224400 Sobic009G224400 Sobic003G135600--Sobic009G224400 Sobic003G135600--Sobic002G309700 Sobic009G191400 Sobic009G191400 Sobic003G135600--Sobic009G191400 Sobic003G135600--Sobic001G181500 Sobic003G135600--Sobic009G211900 Sobic003G135600--Sobic004G260200 Sobic002G309700--Sobic004G260200 Sobic002G309700--Sobic001G047800 Sobic002G356400 Sobic002G356400 Sobic002G309700--Sobic002G356400 Sobic002G309700--Sobic009G215300 Sobic002G309700--Sobic001G404800 Sobic001G074700 Sobic001G074700 Sobic002G309700--Sobic001G074700 Sobic002G296200 Sobic002G296200 Sobic002G309700--Sobic002G296200 Sobic001G465800 Sobic001G465800 Sobic002G309700--Sobic001G465800 Sobic003G215700 Sobic003G215700 Sobic002G309700--Sobic003G215700 Sobic009G117200 Sobic009G117200 Sobic001G206700--Sobic009G117200 Sobic001G206700--Sobic009G215300 Sobic001G206700--Sobic001G181500 Sobic001G206700--Sobic004G155100 Sobic001G206700--Sobic003G135600 Sobic001G206700--Sobic001G073600 Sobic001G206700--Sobic009G211900 Sobic001G206700--Sobic009G191400 Sobic001G206700--Sobic002G309700 Sobic003G152900 Sobic003G152900 Sobic004G030000--Sobic003G152900 Sobic001G350600 Sobic001G350600 Sobic004G030000--Sobic001G350600 Sobic004G030000--Sobic001G465800 Sobic004G030000--Sobic002G309700 Sobic004G030000--Sobic001G074700 Sobic004G170400 Sobic004G170400 Sobic004G030000--Sobic004G170400 Sobic010G007400 Sobic010G007400 Sobic004G030000--Sobic010G007400 Sobic004G344800 Sobic004G344800 Sobic004G030000--Sobic004G344800 Sobic004G159000 Sobic004G159000 Sobic004G030000--Sobic004G159000 Sobic001G282500--Sobic002G309700 Sobic001G282500--Sobic009G215300 Sobic001G282500--Sobic004G260200 Sobic001G282500--Sobic002G356400 Sobic001G282500--Sobic002G395000 Sobic002G308300 Sobic002G308300 Sobic001G282500--Sobic002G308300 Sobic001G282500--Sobic001G181500 Sobic001G282500--Sobic003G135600 Sobic001G282500--Sobic001G350600 Sobic007G012900--Sobic001G181500 Sobic003G276100 Sobic003G276100 Sobic007G012900--Sobic003G276100 Sobic002G401700 Sobic002G401700 Sobic007G012900--Sobic002G401700 Sobic001G008100 Sobic001G008100 Sobic007G012900--Sobic001G008100 Sobic006G041800 Sobic006G041800 Sobic007G012900--Sobic006G041800 Sobic003G148900 Sobic003G148900 Sobic007G012900--Sobic003G148900 Sobic007G012900--Sobic003G135600 Sobic007G012900--Sobic009G191400 Sobic002G079700 Sobic002G079700 Sobic007G012900--Sobic002G079700 Sobic004G260200--Sobic002G309700 Sobic004G260200--Sobic001G047800 Sobic004G260200--Sobic001G465800 Sobic004G260200--Sobic002G395000 Sobic004G260200--Sobic002G356400 Sobic004G260200--Sobic001G404800 Sobic004G260200--Sobic009G215300 Sobic002G263100 Sobic002G263100 Sobic004G260200--Sobic002G263100 Sobic004G260200--Sobic001G074700
Octagon: transcription factors


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