Gene annotation
Transcriptome id Sobic.006G203900.2,Sobic.006G203900.1
Synonym Sb06g027500, VMA10, AVMA10
Functional annotation vacuolar ATPase G subunit, putative, expressed
UniProt C5YF66
Pfam PF03179
Panther DB PTHR12713
NCBI CDD KOG1772; Vacuolar H+-ATPase V1 sector, subunit G
KEGG Orthology K02152; ATPeV1G, V-type H+-transporting ATPase subunit G
Gene Ontology GO:0016471; vacuolar proton-transporting V-type ATPase complex


Orthologs (automatic annotation)
TAIR AT4G23710 : vacuolar ATP synthase subunit G2
RAP-DB (Rice) LOC_Os04g51270.2,LOC_Os04g51270.1 : vacuolar ATPase G subunit, putative, expressed
MaizeGDB (Corn) Zm00025a045365 , Zm00025a013420
Brachypodium KQJ84401 , KQK05072
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
2 Sobic.009G211900 expressed protein -
3 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
4 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
5 Sobic.004G138300 expressed protein -
6 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
7 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
8 Sobic.009G001900 expressed protein -
9 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
10 Sobic.002G395000 bacterial transferase hexapeptide domain containing protein, expressed -
11 Sobic.003G124300 peroxiredoxin, putative, expressed -
12 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
13 Sobic.004G344800 NADH dehydrogenase 1 alpha subcomplex subunit 9,mitochondrial precursor, putative, expressed K03953: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 9
14 Sobic.003G016300 SFT2, putative, expressed -
15 Sobic.003G074900 expressed protein -
16 Sobic.003G238500 -(PubMedID : 26976818)@lactate/malate dehydrogenase, putative, expressed K00026: malate dehydrogenase
17 Sobic.003G322300 expressed protein -
18 Sobic.001G181500 expressed protein -
19 Sobic.009G215300 fiber protein Fb11, putative, expressed -
20 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta


Gene co-expression network
sample Sobic006G203900 Sobic006G203900 Sobic008G136800 Sobic008G136800 Sobic006G203900--Sobic008G136800 Sobic009G211900 Sobic009G211900 Sobic006G203900--Sobic009G211900 Sobic001G035400 Sobic001G035400 Sobic006G203900--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G124300 Sobic006G124300 Sobic006G203900--Sobic006G124300 Sobic003G135600 Sobic003G135600 Sobic006G203900--Sobic003G135600 Sobic009G001900 Sobic009G001900 Sobic006G203900--Sobic009G001900 Sobic007G013900 Sobic007G013900 Sobic006G203900--Sobic007G013900 Sobic008G136800--Sobic006G203900 Sobic008G136800--Sobic009G001900 Sobic008G136800--Sobic009G211900 Sobic008G136800--Sobic007G013900 Sobic001G031800 Sobic001G031800 Sobic008G136800--Sobic001G031800 Sobic008G136800--Sobic006G124300 Sobic007G141100 Sobic007G141100 Sobic008G136800--Sobic007G141100 Sobic002G296200 Sobic002G296200 Sobic008G136800--Sobic002G296200 Sobic003G074900 Sobic003G074900 Sobic008G136800--Sobic003G074900 Sobic009G215300 Sobic009G215300 Sobic009G211900--Sobic009G215300 Sobic009G211900--Sobic006G124300 Sobic001G181500 Sobic001G181500 Sobic009G211900--Sobic001G181500 Sobic009G211900--Sobic006G203900 Sobic009G211900--Sobic003G135600 Sobic002G309700 Sobic002G309700 Sobic009G211900--Sobic002G309700 Sobic009G211900--Sobic008G136800 Sobic009G211900--Sobic001G073600 Sobic004G260200 Sobic004G260200 Sobic009G211900--Sobic004G260200 Sobic004G344800 Sobic004G344800 Sobic001G035400--Sobic004G344800 Sobic001G035400--Sobic006G203900 Sobic008G084100 Sobic008G084100 Sobic001G035400--Sobic008G084100 Sobic007G092100 Sobic007G092100 Sobic001G035400--Sobic007G092100 Sobic009G164700 Sobic009G164700 Sobic001G035400--Sobic009G164700 Sobic002G087000 Sobic002G087000 Sobic001G035400--Sobic002G087000 Sobic001G035400--Sobic001G073600 Sobic001G443200 Sobic001G443200 Sobic001G035400--Sobic001G443200 Sobic001G116000 Sobic001G116000 Sobic001G035400--Sobic001G116000 Sobic009G191400 Sobic009G191400 Sobic001G073600--Sobic009G191400 Sobic009G224400 Sobic009G224400 Sobic001G073600--Sobic009G224400 Sobic001G073600--Sobic003G135600 Sobic002G395000 Sobic002G395000 Sobic001G073600--Sobic002G395000 Sobic001G073600--Sobic004G344800 Sobic007G119600 Sobic007G119600 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic004G138300--Sobic006G203900 Sobic004G138300--Sobic008G136800 Sobic003G238500 Sobic003G238500 Sobic004G138300--Sobic003G238500 Sobic004G138300--Sobic009G001900 Sobic004G262300 Sobic004G262300 Sobic004G138300--Sobic004G262300 Sobic004G138300--Sobic009G211900 Sobic004G138300--Sobic003G074900 Sobic003G322300 Sobic003G322300 Sobic004G138300--Sobic003G322300 Sobic004G138300--Sobic006G124300 Sobic006G124300--Sobic009G211900 Sobic006G124300--Sobic006G203900 Sobic006G124300--Sobic008G136800 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic006G124300--Sobic003G135600 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600 Sobic003G135600--Sobic004G155100 Sobic003G135600--Sobic002G395000 Sobic003G135600--Sobic001G073600 Sobic003G135600--Sobic009G224400 Sobic003G135600--Sobic002G309700 Sobic003G135600--Sobic009G191400 Sobic003G135600--Sobic001G181500 Sobic003G135600--Sobic009G211900 Sobic003G135600--Sobic004G260200 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic009G001900--Sobic006G203900 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic009G001900--Sobic002G309700 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic007G013900--Sobic002G395000 Sobic007G013900--Sobic008G136800
Octagon: transcription factors


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