Gene annotation
Transcriptome id Sobic.008G136800.2
Synonym TIM9, Sb08g018820, emb2474
Functional annotation mitochondrial import inner membrane translocase subunit Tim, putative, expressed
UniProt A0A1Z5R6K5
Pfam PF02953
Panther DB PTHR10898
NCBI CDD KOG3479; Mitochondrial import inner membrane translocase, subunit TIM9
KEGG Orthology K17777; mitochondrial import inner membrane translocase subunit TIM9
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G46560 : Tim10/DDP family zinc finger protein
RAP-DB (Rice) LOC_Os12g38310.1 : mitochondrial import inner membrane translocase subunit Tim, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU5Hr1G021140.3 , HORVU5Hr1G021140.2 , HORVU5Hr1G021140.1
Wheat TraesCS5A02G078900 , TraesCS5D02G093400 , TraesCS5B02G087200
Populus -


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cDNA sequences
Sobic.008G136800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
2 Sobic.009G001900 expressed protein -
3 Sobic.009G211900 expressed protein -
4 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
5 Sobic.001G031800 ribosomal protein L30 containing protein, expressed K02907: RP-L30, MRPL30, large subunit ribosomal protein L30
6 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
7 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
8 Sobic.002G296200 expressed protein -
9 Sobic.003G074900 expressed protein -
10 Sobic.004G138300 expressed protein -
11 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
12 Sobic.002G309700 ATP synthase delta chain, mitochondrial precursor, putative, expressed K02134: ATPeF1D, ATP5D, F-type H+-transporting ATPase subunit delta
13 Sobic.003G135600 bacterial transferase hexapeptide domain containing protein, expressed -
14 Sobic.001G370700 acyl carrier protein, putative, expressed K03955: NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1, acyl-carrier protein
15 Sobic.006G013000 succinate dehydrogenase subunit 3, putative, expressed K00236: SDHC, succinate dehydrogenase (ubiquinone) cytochrome b560 subunit
16 Sobic.009G215300 fiber protein Fb11, putative, expressed -
17 Sobic.004G262300 thioredoxin reductase 2, putative, expressed K00384: trxB, thioredoxin reductase (NADPH)
18 Sobic.001G060300 expressed protein -
19 Sobic.007G177200 peptidase, T1 family, putative, expressed K02731: 20S proteasome subunit alpha 4
20 Sobic.009G016500 expressed protein -


Gene co-expression network
sample Sobic008G136800 Sobic008G136800 Sobic006G203900 Sobic006G203900 Sobic008G136800--Sobic006G203900 Sobic009G001900 Sobic009G001900 Sobic008G136800--Sobic009G001900 Sobic009G211900 Sobic009G211900 Sobic008G136800--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic008G136800--Sobic007G013900 Sobic001G031800 Sobic001G031800 Sobic008G136800--Sobic001G031800 Sobic006G124300 Sobic006G124300 Sobic008G136800--Sobic006G124300 Sobic007G141100 Sobic007G141100 Sobic008G136800--Sobic007G141100 Sobic002G296200 Sobic002G296200 Sobic008G136800--Sobic002G296200 Sobic003G074900 Sobic003G074900 Sobic008G136800--Sobic003G074900 Sobic006G203900--Sobic008G136800 Sobic006G203900--Sobic009G211900 Sobic001G035400 Sobic001G035400 Sobic006G203900--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G203900--Sobic006G124300 Sobic003G135600 Sobic003G135600 Sobic006G203900--Sobic003G135600 Sobic006G203900--Sobic009G001900 Sobic006G203900--Sobic007G013900 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic004G164000 Sobic004G164000 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic004G260200 Sobic004G260200 Sobic009G001900--Sobic004G260200 Sobic002G309700 Sobic002G309700 Sobic009G001900--Sobic002G309700 Sobic009G215300 Sobic009G215300 Sobic009G211900--Sobic009G215300 Sobic009G211900--Sobic006G124300 Sobic001G181500 Sobic001G181500 Sobic009G211900--Sobic001G181500 Sobic009G211900--Sobic006G203900 Sobic009G211900--Sobic003G135600 Sobic009G211900--Sobic002G309700 Sobic009G211900--Sobic008G136800 Sobic009G211900--Sobic001G073600 Sobic009G211900--Sobic004G260200 Sobic007G013900--Sobic009G215300 Sobic004G159000 Sobic004G159000 Sobic007G013900--Sobic004G159000 Sobic002G260200 Sobic002G260200 Sobic007G013900--Sobic002G260200 Sobic006G013000 Sobic006G013000 Sobic007G013900--Sobic006G013000 Sobic007G013900--Sobic002G309700 Sobic007G013900--Sobic001G031800 Sobic007G013900--Sobic004G260200 Sobic002G395000 Sobic002G395000 Sobic007G013900--Sobic002G395000 Sobic007G013900--Sobic008G136800 Sobic001G134200 Sobic001G134200 Sobic001G031800--Sobic001G134200 Sobic002G263100 Sobic002G263100 Sobic001G031800--Sobic002G263100 Sobic003G296800 Sobic003G296800 Sobic001G031800--Sobic003G296800 Sobic001G031800--Sobic004G260200 Sobic001G031800--Sobic007G013900 Sobic001G031800--Sobic002G309700 Sobic002G246800 Sobic002G246800 Sobic001G031800--Sobic002G246800 Sobic001G031800--Sobic008G136800 Sobic007G184001 Sobic007G184001 Sobic001G031800--Sobic007G184001 Sobic006G124300--Sobic009G211900 Sobic006G124300--Sobic006G203900 Sobic006G124300--Sobic008G136800 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic006G124300--Sobic003G135600 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600 Sobic007G141100--Sobic008G136800 Sobic007G141100--Sobic001G031800 Sobic007G141100--Sobic007G013900 Sobic007G141100--Sobic003G074900 Sobic007G141100--Sobic009G001900 Sobic007G141100--Sobic002G246800 Sobic007G141100--Sobic004G164000 Sobic007G141100--Sobic002G260200 Sobic007G141100--Sobic004G159000 Sobic002G296200--Sobic006G013000 Sobic007G134900 Sobic007G134900 Sobic002G296200--Sobic007G134900 Sobic001G074700 Sobic001G074700 Sobic002G296200--Sobic001G074700 Sobic003G215700 Sobic003G215700 Sobic002G296200--Sobic003G215700 Sobic002G296200--Sobic002G309700 Sobic001G134400 Sobic001G134400 Sobic002G296200--Sobic001G134400 Sobic001G047800 Sobic001G047800 Sobic002G296200--Sobic001G047800 Sobic001G286200 Sobic001G286200 Sobic002G296200--Sobic001G286200 Sobic003G129800 Sobic003G129800 Sobic002G296200--Sobic003G129800 Sobic003G074900--Sobic008G136800 Sobic003G074900--Sobic006G124300 Sobic003G074900--Sobic006G203900 Sobic002G387800 Sobic002G387800 Sobic003G074900--Sobic002G387800 Sobic003G074900--Sobic009G211900 Sobic003G016300 Sobic003G016300 Sobic003G074900--Sobic003G016300 Sobic001G219800 Sobic001G219800 Sobic003G074900--Sobic001G219800 Sobic003G074900--Sobic007G141100 Sobic003G074900--Sobic009G001900
Octagon: transcription factors


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