Gene annotation
Transcriptome id Sobic.003G074900.1
Synonym Sb03g006320
Functional annotation expressed protein
UniProt C5XQ29
Pfam -
Panther DB PTHR34208 PTHR34208:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G49720 : -
RAP-DB (Rice) LOC_Os01g05070.1 : expressed protein
MaizeGDB (Corn) Zm00025a023484 , Zm00025a035612
Brachypodium KQK02660
Barley HORVU3Hr1G011540.6 , HORVU3Hr1G011540.7 , HORVU3Hr1G011540.4 , HORVU3Hr1G011540.5 , HORVU3Hr1G011540.2 , HORVU3Hr1G011540.3 , HORVU3Hr1G011540.1
Wheat TraesCS3B02G072500 , TraesCS3B02G072500 , TraesCS3B02G072500 , TraesCS3A02G059900 , TraesCS3A02G059900 , TraesCS3A02G059900 , TraesCS3D02G060100 , TraesCS3D02G060100 , TraesCS3D02G060100
Populus -


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cDNA sequences
Sobic.003G074900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G136800 mitochondrial import inner membrane translocase subunit Tim, putative, expressed K17777: mitochondrial import inner membrane translocase subunit TIM9
2 Sobic.006G124300 metalloprotease ATP23, putative, expressed K18156: ATP23, mitochondrial inner membrane protease ATP23
3 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
4 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
5 Sobic.009G211900 expressed protein -
6 Sobic.003G016300 SFT2, putative, expressed -
7 Sobic.001G219800 methyltransferase, putative, expressed -
8 Sobic.007G141100 expressed protein K18179: cytochrome c oxidase assembly factor 6
9 Sobic.009G001900 expressed protein -
10 Sobic.003G044700 zinc finger family protein, putative, expressed -
11 Sobic.004G138300 expressed protein -
12 Sobic.009G054000 expressed protein -
13 Sobic.008G025700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
14 Sobic.010G197900 expressed protein -
15 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
16 Sobic.007G013900 rickettsia 17 kDa surface antigen family protein, expressed -
17 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
18 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
19 Sobic.009G215300 fiber protein Fb11, putative, expressed -
20 Sobic.001G197000 dehydration response related protein, putative, expressed -


Gene co-expression network
sample Sobic003G074900 Sobic003G074900 Sobic008G136800 Sobic008G136800 Sobic003G074900--Sobic008G136800 Sobic006G124300 Sobic006G124300 Sobic003G074900--Sobic006G124300 Sobic006G203900 Sobic006G203900 Sobic003G074900--Sobic006G203900 Sobic002G387800 Sobic002G387800 Sobic003G074900--Sobic002G387800 Sobic009G211900 Sobic009G211900 Sobic003G074900--Sobic009G211900 Sobic003G016300 Sobic003G016300 Sobic003G074900--Sobic003G016300 Sobic001G219800 Sobic001G219800 Sobic003G074900--Sobic001G219800 Sobic007G141100 Sobic007G141100 Sobic003G074900--Sobic007G141100 Sobic009G001900 Sobic009G001900 Sobic003G074900--Sobic009G001900 Sobic008G136800--Sobic006G203900 Sobic008G136800--Sobic009G001900 Sobic008G136800--Sobic009G211900 Sobic007G013900 Sobic007G013900 Sobic008G136800--Sobic007G013900 Sobic001G031800 Sobic001G031800 Sobic008G136800--Sobic001G031800 Sobic008G136800--Sobic006G124300 Sobic008G136800--Sobic007G141100 Sobic002G296200 Sobic002G296200 Sobic008G136800--Sobic002G296200 Sobic008G136800--Sobic003G074900 Sobic006G124300--Sobic009G211900 Sobic006G124300--Sobic006G203900 Sobic006G124300--Sobic008G136800 Sobic004G260200 Sobic004G260200 Sobic006G124300--Sobic004G260200 Sobic005G091700 Sobic005G091700 Sobic006G124300--Sobic005G091700 Sobic001G030300 Sobic001G030300 Sobic006G124300--Sobic001G030300 Sobic003G135600 Sobic003G135600 Sobic006G124300--Sobic003G135600 Sobic006G124300--Sobic003G074900 Sobic001G350600 Sobic001G350600 Sobic006G124300--Sobic001G350600 Sobic006G203900--Sobic008G136800 Sobic006G203900--Sobic009G211900 Sobic001G035400 Sobic001G035400 Sobic006G203900--Sobic001G035400 Sobic001G073600 Sobic001G073600 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G203900--Sobic006G124300 Sobic006G203900--Sobic003G135600 Sobic006G203900--Sobic009G001900 Sobic006G203900--Sobic007G013900 Sobic002G387800--Sobic009G211900 Sobic009G206600 Sobic009G206600 Sobic002G387800--Sobic009G206600 Sobic002G387800--Sobic003G074900 Sobic002G387800--Sobic006G203900 Sobic002G217500 Sobic002G217500 Sobic002G387800--Sobic002G217500 Sobic002G387800--Sobic003G016300 Sobic001G192700 Sobic001G192700 Sobic002G387800--Sobic001G192700 Sobic008G084100 Sobic008G084100 Sobic002G387800--Sobic008G084100 Sobic002G387800--Sobic006G124300 Sobic009G215300 Sobic009G215300 Sobic009G211900--Sobic009G215300 Sobic009G211900--Sobic006G124300 Sobic001G181500 Sobic001G181500 Sobic009G211900--Sobic001G181500 Sobic009G211900--Sobic006G203900 Sobic009G211900--Sobic003G135600 Sobic002G309700 Sobic002G309700 Sobic009G211900--Sobic002G309700 Sobic009G211900--Sobic008G136800 Sobic009G211900--Sobic001G073600 Sobic009G211900--Sobic004G260200 Sobic002G352200 Sobic002G352200 Sobic003G016300--Sobic002G352200 Sobic003G016300--Sobic002G217500 Sobic003G016300--Sobic001G192700 Sobic003G016300--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic003G016300--Sobic008G018300 Sobic003G016300--Sobic006G203900 Sobic002G255400 Sobic002G255400 Sobic003G016300--Sobic002G255400 Sobic003G016300--Sobic009G211900 Sobic002G420600 Sobic002G420600 Sobic003G016300--Sobic002G420600 Sobic001G352800 Sobic001G352800 Sobic001G219800--Sobic001G352800 Sobic001G219800--Sobic001G192700 Sobic001G219800--Sobic003G016300 Sobic001G219800--Sobic002G255400 Sobic001G219800--Sobic002G217500 Sobic001G219800--Sobic003G074900 Sobic001G219800--Sobic002G420600 Sobic001G219800--Sobic002G352200 Sobic003G075200 Sobic003G075200 Sobic001G219800--Sobic003G075200 Sobic007G141100--Sobic008G136800 Sobic007G141100--Sobic001G031800 Sobic007G141100--Sobic007G013900 Sobic007G141100--Sobic003G074900 Sobic007G141100--Sobic009G001900 Sobic002G246800 Sobic002G246800 Sobic007G141100--Sobic002G246800 Sobic004G164000 Sobic004G164000 Sobic007G141100--Sobic004G164000 Sobic002G260200 Sobic002G260200 Sobic007G141100--Sobic002G260200 Sobic004G159000 Sobic004G159000 Sobic007G141100--Sobic004G159000 Sobic009G001900--Sobic002G296200 Sobic009G001900--Sobic008G136800 Sobic004G066800 Sobic004G066800 Sobic009G001900--Sobic004G066800 Sobic009G001900--Sobic006G203900 Sobic003G322300 Sobic003G322300 Sobic009G001900--Sobic003G322300 Sobic009G001900--Sobic004G164000 Sobic006G231500 Sobic006G231500 Sobic009G001900--Sobic006G231500 Sobic009G001900--Sobic004G260200 Sobic009G001900--Sobic002G309700
Octagon: transcription factors


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