Gene annotation
Transcriptome id Sobic.001G197000.1
Synonym Sb01g017340
Functional annotation dehydration response related protein, putative, expressed
UniProt C5WW90
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF753
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G33170 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os10g36690.4 : dehydration response related protein, putative, expressed
MaizeGDB (Corn) Zm00025a006347
Brachypodium PNT67694
Barley -
Wheat TraesCS6A02G021300 , TraesCS6D02G025000
Populus -


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cDNA sequences
Sobic.001G197000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
2 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
3 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
4 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
5 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
6 Sobic.001G533400 major facilitator superfamily domain-containing protein 5, putative, expressed -
7 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
8 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
9 Sobic.010G031000 expressed protein -
10 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
11 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
12 Sobic.001G508466 - -
13 Sobic.006G083500 SLL1 protein, putative, expressed -
14 Sobic.003G296800 expressed protein -
15 Sobic.002G348100 40S ribosomal protein S13, putative, expressed K02953: RP-S13e, small subunit ribosomal protein S13e
16 Sobic.002G136700 expressed protein -
17 Sobic.002G355700 histone H3, putative, expressed K11253: histone H3
18 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
19 Sobic.002G135200 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
20 Sobic.001G502900 nicotiana lesion-inducing like, putative, expressed -


Gene co-expression network
sample Sobic001G197000 Sobic001G197000 Sobic004G159400 Sobic004G159400 Sobic001G197000--Sobic004G159400 Sobic001G077000 Sobic001G077000 Sobic001G197000--Sobic001G077000 Sobic002G329900 Sobic002G329900 Sobic001G197000--Sobic002G329900 Sobic003G215700 Sobic003G215700 Sobic001G197000--Sobic003G215700 Sobic001G047800 Sobic001G047800 Sobic001G197000--Sobic001G047800 Sobic001G533400 Sobic001G533400 Sobic001G197000--Sobic001G533400 Sobic003G209000 Sobic003G209000 Sobic001G197000--Sobic003G209000 Sobic002G418400 Sobic002G418400 Sobic001G197000--Sobic002G418400 Sobic010G031000 Sobic010G031000 Sobic001G197000--Sobic010G031000 Sobic004G159400--Sobic001G197000 Sobic001G508466 Sobic001G508466 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic004G159400--Sobic001G047800 Sobic003G273000 Sobic003G273000 Sobic004G159400--Sobic003G273000 Sobic004G159400--Sobic002G418400 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G232500 Sobic004G232500 Sobic004G159400--Sobic004G232500 Sobic003G072300 Sobic003G072300 Sobic001G077000--Sobic003G072300 Sobic001G077000--Sobic002G418400 Sobic003G155400 Sobic003G155400 Sobic001G077000--Sobic003G155400 Sobic001G077000--Sobic003G209000 Sobic002G296200 Sobic002G296200 Sobic001G077000--Sobic002G296200 Sobic006G083500 Sobic006G083500 Sobic001G077000--Sobic006G083500 Sobic001G077000--Sobic003G215700 Sobic004G060500 Sobic004G060500 Sobic001G077000--Sobic004G060500 Sobic003G296800 Sobic003G296800 Sobic001G077000--Sobic003G296800 Sobic002G329900--Sobic001G047800 Sobic001G110000 Sobic001G110000 Sobic002G329900--Sobic001G110000 Sobic001G404800 Sobic001G404800 Sobic002G329900--Sobic001G404800 Sobic002G263100 Sobic002G263100 Sobic002G329900--Sobic002G263100 Sobic002G329900--Sobic003G215700 Sobic002G329900--Sobic001G197000 Sobic001G519000 Sobic001G519000 Sobic002G329900--Sobic001G519000 Sobic002G329900--Sobic008G006300 Sobic002G348100 Sobic002G348100 Sobic002G329900--Sobic002G348100 Sobic003G215700--Sobic006G083500 Sobic003G215700--Sobic002G418400 Sobic003G215700--Sobic001G047800 Sobic003G215700--Sobic003G209000 Sobic004G211833 Sobic004G211833 Sobic003G215700--Sobic004G211833 Sobic003G215700--Sobic001G404800 Sobic003G215700--Sobic004G060500 Sobic001G134400 Sobic001G134400 Sobic003G215700--Sobic001G134400 Sobic010G012500 Sobic010G012500 Sobic003G215700--Sobic010G012500 Sobic002G309700 Sobic002G309700 Sobic001G047800--Sobic002G309700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic001G047800--Sobic002G263100 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G047800--Sobic001G519000 Sobic001G339700 Sobic001G339700 Sobic001G533400--Sobic001G339700 Sobic010G001900 Sobic010G001900 Sobic001G533400--Sobic010G001900 Sobic001G119100 Sobic001G119100 Sobic001G533400--Sobic001G119100 Sobic002G201600 Sobic002G201600 Sobic001G533400--Sobic002G201600 Sobic008G025600 Sobic008G025600 Sobic001G533400--Sobic008G025600 Sobic004G205100 Sobic004G205100 Sobic001G533400--Sobic004G205100 Sobic005G091500 Sobic005G091500 Sobic001G533400--Sobic005G091500 Sobic001G119000 Sobic001G119000 Sobic001G533400--Sobic001G119000 Sobic001G252300 Sobic001G252300 Sobic001G533400--Sobic001G252300 Sobic004G259200 Sobic004G259200 Sobic003G209000--Sobic004G259200 Sobic003G209000--Sobic001G404800 Sobic003G209000--Sobic002G418400 Sobic001G018500 Sobic001G018500 Sobic003G209000--Sobic001G018500 Sobic003G209000--Sobic006G083500 Sobic003G209000--Sobic003G215700 Sobic007G051000 Sobic007G051000 Sobic003G209000--Sobic007G051000 Sobic009G119900 Sobic009G119900 Sobic003G209000--Sobic009G119900 Sobic002G398901 Sobic002G398901 Sobic003G209000--Sobic002G398901 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic002G418400--Sobic003G209000 Sobic002G418400--Sobic002G398901 Sobic002G418400--Sobic004G211833 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic009G069600 Sobic009G069600 Sobic010G031000--Sobic009G069600 Sobic010G031000--Sobic003G273000 Sobic010G031000--Sobic004G260200 Sobic010G031000--Sobic001G197000 Sobic010G031000--Sobic001G404800 Sobic010G031000--Sobic001G047800 Sobic010G031000--Sobic001G508466 Sobic010G031000--Sobic003G215700 Sobic010G216400 Sobic010G216400 Sobic010G031000--Sobic010G216400
Octagon: transcription factors


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