Gene annotation
Transcriptome id Sobic.001G219800.3,Sobic.001G219800.6,Sobic.001G219800.5,Sobic.001G219800.4
Synonym Sb01g019320
Functional annotation methyltransferase, putative, expressed
UniProt A0A1B6QK79 , A0A1B6QK85
Pfam PF03141
Panther DB PTHR10108 PTHR10108:SF704
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008168; methyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G23300 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os10g33720.3,LOC_Os10g33720.1 : methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a025427 , Zm00025a006601 , Zm00025a036283 , Zm00025a038116 , Zm00025a006834 , Zm00025a017873 , Zm00025a017638
Brachypodium KQJ97089 , KQJ97093 , KQJ97091 , KQJ97090 , KQJ97092
Barley HORVU1Hr1G041060.6 , HORVU1Hr1G041060.7 , HORVU1Hr1G041060.4 , HORVU1Hr1G041060.5 , HORVU1Hr1G041060.2 , HORVU1Hr1G041060.1 , HORVU1Hr1G041060.8 , HORVU1Hr1G041060.9 , HORVU1Hr1G041060.10 , HORVU1Hr1G041060.11
Wheat TraesCS1D02G153300 , TraesCS1B02G170600 , TraesCS1B02G170600 , TraesCS1A02G154400 , TraesCS1A02G154400
Populus -


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cDNA sequences
Sobic.001G219800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
2 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
3 Sobic.003G016300 SFT2, putative, expressed -
4 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
5 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
6 Sobic.003G074900 expressed protein -
7 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
8 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
9 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
10 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
11 Sobic.001G091701 - -
12 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
13 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
14 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
15 Sobic.001G347700 protein phosphotase protein, putative, expressed -
16 Sobic.009G218000 VIP1 protein, putative, expressed -
17 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
18 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
19 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
20 Sobic.003G167000 protein phosphotase protein, putative, expressed -


Gene co-expression network
sample Sobic001G219800 Sobic001G219800 Sobic001G352800 Sobic001G352800 Sobic001G219800--Sobic001G352800 Sobic001G192700 Sobic001G192700 Sobic001G219800--Sobic001G192700 Sobic003G016300 Sobic003G016300 Sobic001G219800--Sobic003G016300 Sobic002G255400 Sobic002G255400 Sobic001G219800--Sobic002G255400 Sobic002G217500 Sobic002G217500 Sobic001G219800--Sobic002G217500 Sobic003G074900 Sobic003G074900 Sobic001G219800--Sobic003G074900 Sobic002G420600 Sobic002G420600 Sobic001G219800--Sobic002G420600 Sobic002G352200 Sobic002G352200 Sobic001G219800--Sobic002G352200 Sobic003G075200 Sobic003G075200 Sobic001G219800--Sobic003G075200 Sobic001G352800--Sobic001G219800 Sobic002G232400 Sobic002G232400 Sobic001G352800--Sobic002G232400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic002G090500 Sobic002G090500 Sobic001G352800--Sobic002G090500 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic001G192700--Sobic001G219800 Sobic001G192700--Sobic003G016300 Sobic001G192700--Sobic001G352800 Sobic001G192700--Sobic002G232400 Sobic001G135200 Sobic001G135200 Sobic001G192700--Sobic001G135200 Sobic001G348000 Sobic001G348000 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic002G387800 Sobic002G387800 Sobic001G192700--Sobic002G387800 Sobic003G016300--Sobic002G352200 Sobic003G016300--Sobic002G217500 Sobic003G016300--Sobic001G192700 Sobic003G016300--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic003G016300--Sobic002G255400 Sobic009G211900 Sobic009G211900 Sobic003G016300--Sobic009G211900 Sobic003G016300--Sobic002G420600 Sobic002G255400--Sobic003G260600 Sobic003G089100 Sobic003G089100 Sobic002G255400--Sobic003G089100 Sobic007G014700 Sobic007G014700 Sobic002G255400--Sobic007G014700 Sobic002G255400--Sobic008G018300 Sobic002G255400--Sobic002G420600 Sobic003G201500 Sobic003G201500 Sobic002G255400--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic002G255400--Sobic003G013700 Sobic002G255400--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic002G255400--Sobic001G387200 Sobic002G217500--Sobic003G016300 Sobic002G217500--Sobic002G352200 Sobic002G217500--Sobic002G255400 Sobic006G153200 Sobic006G153200 Sobic002G217500--Sobic006G153200 Sobic002G217500--Sobic001G219800 Sobic002G217500--Sobic008G018300 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic009G218000 Sobic009G218000 Sobic002G217500--Sobic009G218000 Sobic008G136800 Sobic008G136800 Sobic003G074900--Sobic008G136800 Sobic006G124300 Sobic006G124300 Sobic003G074900--Sobic006G124300 Sobic003G074900--Sobic006G203900 Sobic003G074900--Sobic002G387800 Sobic003G074900--Sobic009G211900 Sobic003G074900--Sobic003G016300 Sobic003G074900--Sobic001G219800 Sobic007G141100 Sobic007G141100 Sobic003G074900--Sobic007G141100 Sobic009G001900 Sobic009G001900 Sobic003G074900--Sobic009G001900 Sobic002G420600--Sobic003G089100 Sobic004G173700 Sobic004G173700 Sobic002G420600--Sobic004G173700 Sobic006G120900 Sobic006G120900 Sobic002G420600--Sobic006G120900 Sobic002G420600--Sobic003G201500 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic001G303900 Sobic001G303900 Sobic002G420600--Sobic001G303900 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200 Sobic002G352200--Sobic002G420600 Sobic002G352200--Sobic003G016300 Sobic002G352200--Sobic008G018300 Sobic002G352200--Sobic002G255400 Sobic002G352200--Sobic004G173700 Sobic002G352200--Sobic003G260600 Sobic009G224400 Sobic009G224400 Sobic002G352200--Sobic009G224400 Sobic002G124900 Sobic002G124900 Sobic002G352200--Sobic002G124900 Sobic001G073600 Sobic001G073600 Sobic002G352200--Sobic001G073600 Sobic004G356300 Sobic004G356300 Sobic003G075200--Sobic004G356300 Sobic003G075200--Sobic001G352800 Sobic008G057900 Sobic008G057900 Sobic003G075200--Sobic008G057900 Sobic010G188900 Sobic010G188900 Sobic003G075200--Sobic010G188900 Sobic009G220000 Sobic009G220000 Sobic003G075200--Sobic009G220000 Sobic002G153000 Sobic002G153000 Sobic003G075200--Sobic002G153000 Sobic003G075200--Sobic002G090500 Sobic004G007700 Sobic004G007700 Sobic003G075200--Sobic004G007700 Sobic003G075200--Sobic006G153200
Octagon: transcription factors


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