Gene annotation
Transcriptome id Sobic.003G167000.1
Synonym Sb03g016300
Functional annotation protein phosphotase protein, putative, expressed
UniProt C5XKP2
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF330
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G68410 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os01g32964.1 : protein phosphotase protein, putative, expressed
MaizeGDB (Corn) Zm00025a024652
Brachypodium KQK04500 , KQK04501 , KQK04502 , KQK04503 , PNT70588
Barley HORVU3Hr1G044830.8 , HORVU3Hr1G044830.4 , HORVU3Hr1G044830.5 , HORVU3Hr1G044830.7 , HORVU3Hr1G044830.1 , HORVU3Hr1G044830.2 , HORVU3Hr1G044830.3
Wheat -
Populus -


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cDNA sequences
Sobic.003G167000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
2 Sobic.001G347700 protein phosphotase protein, putative, expressed -
3 Sobic.001G013200 actin-related protein 2/3 complex subunit 4, putative, expressed K05755: actin related protein 2/3 complex, subunit 4
4 Sobic.007G003100 transmembrane protein 18, putative, expressed -
5 Sobic.009G218000 VIP1 protein, putative, expressed -
6 Sobic.003G274200 5-nucleotidase surE, putative, expressed K03787: 5'-nucleotidase
7 Sobic.003G113400 ribosomal protein L3, putative, expressed K02906: RP-L3, MRPL3, large subunit ribosomal protein L3
8 Sobic.003G190600 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
9 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
10 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
11 Sobic.007G201000 methyltransferase domain containing protein, expressed -
12 Sobic.009G112900 expressed protein K18170: LYRM7, complex III assembly factor LYRM7
13 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
14 Sobic.004G141400 START domain containing protein, putative, expressed -
15 Sobic.002G276800 ER lumen protein retaining receptor, putative, expressed -
16 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
18 Sobic.010G028400 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
19 Sobic.004G017900 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
20 Sobic.002G070300 expressed protein -


Gene co-expression network
sample Sobic003G167000 Sobic003G167000 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G048700--Sobic007G003100 Sobic007G048700--Sobic001G347700 Sobic008G132200 Sobic008G132200 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic007G048700--Sobic001G013200 Sobic001G347700--Sobic007G048700 Sobic001G347700--Sobic003G167000 Sobic001G352800 Sobic001G352800 Sobic001G347700--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic001G347700--Sobic001G485300 Sobic003G260600 Sobic003G260600 Sobic001G347700--Sobic003G260600 Sobic010G028400 Sobic010G028400 Sobic001G347700--Sobic010G028400 Sobic002G352200 Sobic002G352200 Sobic001G347700--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic001G347700--Sobic002G217500 Sobic004G040700 Sobic004G040700 Sobic001G347700--Sobic004G040700 Sobic001G013200--Sobic003G167000 Sobic001G013200--Sobic007G048700 Sobic001G013200--Sobic001G035400 Sobic008G014300 Sobic008G014300 Sobic001G013200--Sobic008G014300 Sobic006G203900 Sobic006G203900 Sobic001G013200--Sobic006G203900 Sobic009G112900 Sobic009G112900 Sobic001G013200--Sobic009G112900 Sobic003G131300 Sobic003G131300 Sobic001G013200--Sobic003G131300 Sobic010G197900 Sobic010G197900 Sobic001G013200--Sobic010G197900 Sobic001G013200--Sobic007G003100 Sobic004G039400 Sobic004G039400 Sobic007G003100--Sobic004G039400 Sobic007G003100--Sobic007G048700 Sobic007G003100--Sobic003G167000 Sobic007G003100--Sobic009G112900 Sobic001G443200 Sobic001G443200 Sobic007G003100--Sobic001G443200 Sobic009G206600 Sobic009G206600 Sobic007G003100--Sobic009G206600 Sobic001G060300 Sobic001G060300 Sobic007G003100--Sobic001G060300 Sobic007G003100--Sobic006G203900 Sobic010G040900 Sobic010G040900 Sobic007G003100--Sobic010G040900 Sobic009G218000--Sobic006G153200 Sobic001G309200 Sobic001G309200 Sobic009G218000--Sobic001G309200 Sobic009G218000--Sobic003G167000 Sobic009G218000--Sobic002G217500 Sobic002G422400 Sobic002G422400 Sobic009G218000--Sobic002G422400 Sobic009G218000--Sobic001G352800 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic008G011800 Sobic008G011800 Sobic009G218000--Sobic008G011800 Sobic003G089100 Sobic003G089100 Sobic003G274200--Sobic003G089100 Sobic003G129900 Sobic003G129900 Sobic003G274200--Sobic003G129900 Sobic002G228900 Sobic002G228900 Sobic003G274200--Sobic002G228900 Sobic003G274200--Sobic003G260600 Sobic002G420600 Sobic002G420600 Sobic003G274200--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic003G274200--Sobic001G387200 Sobic003G274200--Sobic003G167000 Sobic002G255400 Sobic002G255400 Sobic003G274200--Sobic002G255400 Sobic007G014700 Sobic007G014700 Sobic003G274200--Sobic007G014700 Sobic003G113400--Sobic003G167000 Sobic009G041800 Sobic009G041800 Sobic003G113400--Sobic009G041800 Sobic004G334200 Sobic004G334200 Sobic003G113400--Sobic004G334200 Sobic007G191600 Sobic007G191600 Sobic003G113400--Sobic007G191600 Sobic001G203600 Sobic001G203600 Sobic003G113400--Sobic001G203600 Sobic004G043600 Sobic004G043600 Sobic003G113400--Sobic004G043600 Sobic002G402500 Sobic002G402500 Sobic003G113400--Sobic002G402500 Sobic010G250000 Sobic010G250000 Sobic003G113400--Sobic010G250000 Sobic001G052100 Sobic001G052100 Sobic003G113400--Sobic001G052100 Sobic002G395500 Sobic002G395500 Sobic003G190600--Sobic002G395500 Sobic001G389200 Sobic001G389200 Sobic003G190600--Sobic001G389200 Sobic002G023100 Sobic002G023100 Sobic003G190600--Sobic002G023100 Sobic001G378200 Sobic001G378200 Sobic003G190600--Sobic001G378200 Sobic003G190600--Sobic001G485300 Sobic007G118500 Sobic007G118500 Sobic003G190600--Sobic007G118500 Sobic006G012700 Sobic006G012700 Sobic003G190600--Sobic006G012700 Sobic004G060300 Sobic004G060300 Sobic003G190600--Sobic004G060300 Sobic001G047600 Sobic001G047600 Sobic003G190600--Sobic001G047600 Sobic006G153200--Sobic009G218000 Sobic006G153200--Sobic002G217500 Sobic004G100100 Sobic004G100100 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic006G153200--Sobic003G113400 Sobic006G153200--Sobic003G260600 Sobic006G153200--Sobic008G011800
Octagon: transcription factors


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