Gene annotation
Transcriptome id Sobic.009G218000.1
Synonym Sb09g027290
Functional annotation VIP1 protein, putative, expressed
UniProt C5YUY0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g47470.2 : VIP1 protein, putative, expressed
MaizeGDB (Corn) Zm00025a003886 , Zm00025a036499
Brachypodium KQK05068
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.009G218000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
2 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
3 Sobic.003G167000 protein phosphotase protein, putative, expressed -
4 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
5 Sobic.002G422400 adenylate cyclase family protein, expressed -
6 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
7 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
8 Sobic.001G155200 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
9 Sobic.008G011800 DTW domain containing protein, putative, expressed -
10 Sobic.001G347700 protein phosphotase protein, putative, expressed -
11 Sobic.007G049900 MYB family transcription factor, putative, expressed -
12 Sobic.003G075200 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
13 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
14 Sobic.007G003100 transmembrane protein 18, putative, expressed -
15 Sobic.001G188000 SAM-dependent methyltransferase, putative, expressed -
16 Sobic.004G100100 expressed protein -
17 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
18 Sobic.001G219800 methyltransferase, putative, expressed -
19 Sobic.004G040700 expressed protein -
20 Sobic.001G282200 ribosomal protein L35, putative, expressed -


Gene co-expression network
sample Sobic009G218000 Sobic009G218000 Sobic006G153200 Sobic006G153200 Sobic009G218000--Sobic006G153200 Sobic001G309200 Sobic001G309200 Sobic009G218000--Sobic001G309200 Sobic003G167000 Sobic003G167000 Sobic009G218000--Sobic003G167000 Sobic002G217500 Sobic002G217500 Sobic009G218000--Sobic002G217500 Sobic002G422400 Sobic002G422400 Sobic009G218000--Sobic002G422400 Sobic001G352800 Sobic001G352800 Sobic009G218000--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic009G218000--Sobic001G485300 Sobic001G155200 Sobic001G155200 Sobic009G218000--Sobic001G155200 Sobic008G011800 Sobic008G011800 Sobic009G218000--Sobic008G011800 Sobic006G153200--Sobic009G218000 Sobic006G153200--Sobic002G217500 Sobic004G100100 Sobic004G100100 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic003G260600 Sobic003G260600 Sobic006G153200--Sobic003G260600 Sobic006G153200--Sobic008G011800 Sobic002G348400 Sobic002G348400 Sobic001G309200--Sobic002G348400 Sobic001G188000 Sobic001G188000 Sobic001G309200--Sobic001G188000 Sobic001G309200--Sobic003G260600 Sobic001G117900 Sobic001G117900 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic002G308000 Sobic002G308000 Sobic001G309200--Sobic002G308000 Sobic002G392400 Sobic002G392400 Sobic001G309200--Sobic002G392400 Sobic010G153400 Sobic010G153400 Sobic001G309200--Sobic010G153400 Sobic007G086600 Sobic007G086600 Sobic001G309200--Sobic007G086600 Sobic007G048700 Sobic007G048700 Sobic003G167000--Sobic007G048700 Sobic001G347700 Sobic001G347700 Sobic003G167000--Sobic001G347700 Sobic001G013200 Sobic001G013200 Sobic003G167000--Sobic001G013200 Sobic007G003100 Sobic007G003100 Sobic003G167000--Sobic007G003100 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic003G167000--Sobic006G153200 Sobic003G016300 Sobic003G016300 Sobic002G217500--Sobic003G016300 Sobic002G352200 Sobic002G352200 Sobic002G217500--Sobic002G352200 Sobic002G255400 Sobic002G255400 Sobic002G217500--Sobic002G255400 Sobic002G217500--Sobic006G153200 Sobic001G219800 Sobic001G219800 Sobic002G217500--Sobic001G219800 Sobic008G018300 Sobic008G018300 Sobic002G217500--Sobic008G018300 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic002G217500--Sobic009G218000 Sobic002G422400--Sobic009G218000 Sobic001G378200 Sobic001G378200 Sobic002G422400--Sobic001G378200 Sobic001G358500 Sobic001G358500 Sobic002G422400--Sobic001G358500 Sobic002G276800 Sobic002G276800 Sobic002G422400--Sobic002G276800 Sobic006G041800 Sobic006G041800 Sobic002G422400--Sobic006G041800 Sobic004G151200 Sobic004G151200 Sobic002G422400--Sobic004G151200 Sobic001G451901 Sobic001G451901 Sobic002G422400--Sobic001G451901 Sobic002G422400--Sobic006G153200 Sobic002G422400--Sobic003G190600 Sobic001G352800--Sobic001G219800 Sobic002G232400 Sobic002G232400 Sobic001G352800--Sobic002G232400 Sobic001G352800--Sobic002G255400 Sobic001G352800--Sobic003G260600 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic002G090500 Sobic002G090500 Sobic001G352800--Sobic002G090500 Sobic001G192700 Sobic001G192700 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic001G485300--Sobic002G348400 Sobic001G485300--Sobic003G085500 Sobic001G485300--Sobic002G276800 Sobic001G485300--Sobic006G041800 Sobic001G485300--Sobic003G190600 Sobic001G485300--Sobic002G392400 Sobic004G054700 Sobic004G054700 Sobic001G485300--Sobic004G054700 Sobic001G485300--Sobic001G347700 Sobic001G485300--Sobic001G352800 Sobic001G155200--Sobic009G218000 Sobic001G155200--Sobic008G018300 Sobic001G282200 Sobic001G282200 Sobic001G155200--Sobic001G282200 Sobic003G349900 Sobic003G349900 Sobic001G155200--Sobic003G349900 Sobic001G143900 Sobic001G143900 Sobic001G155200--Sobic001G143900 Sobic003G396800 Sobic003G396800 Sobic001G155200--Sobic003G396800 Sobic002G397900 Sobic002G397900 Sobic001G155200--Sobic002G397900 Sobic010G253400 Sobic010G253400 Sobic001G155200--Sobic010G253400 Sobic006G050100 Sobic006G050100 Sobic001G155200--Sobic006G050100 Sobic002G420100 Sobic002G420100 Sobic008G011800--Sobic002G420100 Sobic010G253200 Sobic010G253200 Sobic008G011800--Sobic010G253200 Sobic008G011800--Sobic003G260600 Sobic002G414800 Sobic002G414800 Sobic008G011800--Sobic002G414800 Sobic004G017900 Sobic004G017900 Sobic008G011800--Sobic004G017900 Sobic008G011800--Sobic001G188000 Sobic010G188900 Sobic010G188900 Sobic008G011800--Sobic010G188900 Sobic008G011800--Sobic001G309200 Sobic008G011800--Sobic002G392400
Octagon: transcription factors


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