Gene annotation
Transcriptome id Sobic.001G347700.1
Synonym Sb01g033320
Functional annotation protein phosphotase protein, putative, expressed
UniProt A0A1B6QMQ8
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF25
NCBI CDD KOG0698; Serine/threonine protein phosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT1G47380 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os03g27780.1 : protein phosphotase protein, putative, expressed
MaizeGDB (Corn) Zm00025a052132 , Zm00025a002755
Brachypodium PNT77285
Barley -
Wheat TraesCS4A02G143500 , TraesCSU02G068800 , TraesCSU02G068800 , TraesCSU02G068800 , TraesCSU02G068800 , TraesCS4D02G160500 , TraesCS4D02G160500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
2 Sobic.003G167000 protein phosphotase protein, putative, expressed -
3 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
4 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
5 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
6 Sobic.010G028400 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
7 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
8 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
9 Sobic.004G040700 expressed protein -
10 Sobic.003G016300 SFT2, putative, expressed -
11 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
12 Sobic.009G218000 VIP1 protein, putative, expressed -
13 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
14 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
15 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
16 Sobic.008G132200 tetratricopeptide repeat domain containing protein, expressed -
17 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
18 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
19 Sobic.001G219800 methyltransferase, putative, expressed -
20 Sobic.003G372200 AGC_AGC_other_PDK1_Pk61C.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed K06276: 3-phosphoinositide dependent protein kinase-1


Gene co-expression network
sample Sobic001G347700 Sobic001G347700 Sobic007G048700 Sobic007G048700 Sobic001G347700--Sobic007G048700 Sobic003G167000 Sobic003G167000 Sobic001G347700--Sobic003G167000 Sobic001G352800 Sobic001G352800 Sobic001G347700--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic001G347700--Sobic001G485300 Sobic003G260600 Sobic003G260600 Sobic001G347700--Sobic003G260600 Sobic010G028400 Sobic010G028400 Sobic001G347700--Sobic010G028400 Sobic002G352200 Sobic002G352200 Sobic001G347700--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic001G347700--Sobic002G217500 Sobic004G040700 Sobic004G040700 Sobic001G347700--Sobic004G040700 Sobic007G048700--Sobic003G167000 Sobic002G070300 Sobic002G070300 Sobic007G048700--Sobic002G070300 Sobic001G035400 Sobic001G035400 Sobic007G048700--Sobic001G035400 Sobic009G220000 Sobic009G220000 Sobic007G048700--Sobic009G220000 Sobic007G003100 Sobic007G003100 Sobic007G048700--Sobic007G003100 Sobic007G048700--Sobic001G347700 Sobic008G132200 Sobic008G132200 Sobic007G048700--Sobic008G132200 Sobic001G343000 Sobic001G343000 Sobic007G048700--Sobic001G343000 Sobic001G013200 Sobic001G013200 Sobic007G048700--Sobic001G013200 Sobic003G167000--Sobic007G048700 Sobic003G167000--Sobic001G347700 Sobic003G167000--Sobic001G013200 Sobic003G167000--Sobic007G003100 Sobic009G218000 Sobic009G218000 Sobic003G167000--Sobic009G218000 Sobic003G274200 Sobic003G274200 Sobic003G167000--Sobic003G274200 Sobic003G113400 Sobic003G113400 Sobic003G167000--Sobic003G113400 Sobic003G190600 Sobic003G190600 Sobic003G167000--Sobic003G190600 Sobic006G153200 Sobic006G153200 Sobic003G167000--Sobic006G153200 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic002G232400 Sobic002G232400 Sobic001G352800--Sobic002G232400 Sobic002G255400 Sobic002G255400 Sobic001G352800--Sobic002G255400 Sobic001G352800--Sobic003G260600 Sobic003G075200 Sobic003G075200 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic002G090500 Sobic002G090500 Sobic001G352800--Sobic002G090500 Sobic001G192700 Sobic001G192700 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic002G348400 Sobic002G348400 Sobic001G485300--Sobic002G348400 Sobic001G485300--Sobic003G085500 Sobic002G276800 Sobic002G276800 Sobic001G485300--Sobic002G276800 Sobic006G041800 Sobic006G041800 Sobic001G485300--Sobic006G041800 Sobic001G485300--Sobic003G190600 Sobic002G392400 Sobic002G392400 Sobic001G485300--Sobic002G392400 Sobic004G054700 Sobic004G054700 Sobic001G485300--Sobic004G054700 Sobic001G485300--Sobic001G347700 Sobic001G485300--Sobic001G352800 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G089100 Sobic003G089100 Sobic003G260600--Sobic003G089100 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic007G014700 Sobic007G014700 Sobic003G260600--Sobic007G014700 Sobic010G028400--Sobic001G343000 Sobic010G028400--Sobic001G347700 Sobic010G028400--Sobic003G167000 Sobic007G208000 Sobic007G208000 Sobic010G028400--Sobic007G208000 Sobic010G028400--Sobic007G048700 Sobic007G201000 Sobic007G201000 Sobic010G028400--Sobic007G201000 Sobic004G017900 Sobic004G017900 Sobic010G028400--Sobic004G017900 Sobic001G188000 Sobic001G188000 Sobic010G028400--Sobic001G188000 Sobic010G028400--Sobic003G260600 Sobic002G352200--Sobic002G420600 Sobic003G016300 Sobic003G016300 Sobic002G352200--Sobic003G016300 Sobic008G018300 Sobic008G018300 Sobic002G352200--Sobic008G018300 Sobic002G352200--Sobic002G255400 Sobic004G173700 Sobic004G173700 Sobic002G352200--Sobic004G173700 Sobic002G352200--Sobic003G260600 Sobic009G224400 Sobic009G224400 Sobic002G352200--Sobic009G224400 Sobic002G124900 Sobic002G124900 Sobic002G352200--Sobic002G124900 Sobic001G073600 Sobic001G073600 Sobic002G352200--Sobic001G073600 Sobic002G217500--Sobic003G016300 Sobic002G217500--Sobic002G352200 Sobic002G217500--Sobic002G255400 Sobic002G217500--Sobic006G153200 Sobic002G217500--Sobic001G219800 Sobic002G217500--Sobic008G018300 Sobic002G217500--Sobic003G260600 Sobic007G023400 Sobic007G023400 Sobic002G217500--Sobic007G023400 Sobic002G217500--Sobic009G218000 Sobic004G040700--Sobic001G347700 Sobic004G040700--Sobic001G485300 Sobic004G040700--Sobic009G218000 Sobic004G040700--Sobic001G352800 Sobic007G119600 Sobic007G119600 Sobic004G040700--Sobic007G119600 Sobic004G040700--Sobic003G167000 Sobic007G022700 Sobic007G022700 Sobic004G040700--Sobic007G022700 Sobic004G040700--Sobic002G217500 Sobic004G040700--Sobic007G208000
Octagon: transcription factors


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