Gene annotation
Transcriptome id Sobic.008G018300.2,Sobic.008G018300.3
Synonym Sb08g001590
Functional annotation expressed protein
UniProt A0A1B6PAT2
Pfam -
Panther DB PTHR35693
NCBI CDD -
KEGG Orthology K17402; small subunit ribosomal protein S23
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26750 : -
RAP-DB (Rice) LOC_Os12g10650.1 : expressed protein
MaizeGDB (Corn) Zm00025a028974
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
2 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
3 Sobic.001G387200 expressed protein -
4 Sobic.004G173700 SLL1 protein, putative, expressed -
5 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
6 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
7 Sobic.001G282200 ribosomal protein L35, putative, expressed -
8 Sobic.003G129900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
9 Sobic.003G016300 SFT2, putative, expressed -
10 Sobic.004G039400 Constitutively expressed genes(PubMedID : 24456189)@- K03257: translation initiation factor 4A
11 Sobic.009G224400 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
12 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.002G217500 WD domain, G-beta repeat domain containing protein, expressed K14004: protein transport protein SEC13
14 Sobic.007G119600 clathrin adaptor complex small chain domain containing protein, expressed K12403: AP-4 complex subunit sigma-1
15 Sobic.002G397900 39S ribosomal protein L46, mitochondrial precursor, putative, expressed K17427: large subunit ribosomal protein L46
16 Sobic.004G093600 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
17 Sobic.001G457000 ATP synthase gamma chain, putative, expressed K02136: ATPeF1G, ATP5C1, F-type H+-transporting ATPase subunit gamma
18 Sobic.004G100100 expressed protein -
19 Sobic.004G218600 succinyl-CoA ligase beta-chain, mitochondrial precursor, putative, expressed K01900: succinyl-CoA synthetase beta subunit
20 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase


Gene co-expression network
sample Sobic008G018300 Sobic008G018300 Sobic002G255400 Sobic002G255400 Sobic008G018300--Sobic002G255400 Sobic002G352200 Sobic002G352200 Sobic008G018300--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic008G018300--Sobic001G387200 Sobic004G173700 Sobic004G173700 Sobic008G018300--Sobic004G173700 Sobic002G420600 Sobic002G420600 Sobic008G018300--Sobic002G420600 Sobic003G260600 Sobic003G260600 Sobic008G018300--Sobic003G260600 Sobic001G282200 Sobic001G282200 Sobic008G018300--Sobic001G282200 Sobic003G129900 Sobic003G129900 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300 Sobic002G255400--Sobic003G260600 Sobic003G089100 Sobic003G089100 Sobic002G255400--Sobic003G089100 Sobic007G014700 Sobic007G014700 Sobic002G255400--Sobic007G014700 Sobic002G255400--Sobic008G018300 Sobic002G255400--Sobic002G420600 Sobic003G201500 Sobic003G201500 Sobic002G255400--Sobic003G201500 Sobic003G013700 Sobic003G013700 Sobic002G255400--Sobic003G013700 Sobic002G255400--Sobic002G352200 Sobic002G255400--Sobic001G387200 Sobic002G352200--Sobic002G420600 Sobic002G352200--Sobic003G016300 Sobic002G352200--Sobic008G018300 Sobic002G352200--Sobic002G255400 Sobic002G352200--Sobic004G173700 Sobic002G352200--Sobic003G260600 Sobic009G224400 Sobic009G224400 Sobic002G352200--Sobic009G224400 Sobic002G124900 Sobic002G124900 Sobic002G352200--Sobic002G124900 Sobic001G073600 Sobic001G073600 Sobic002G352200--Sobic001G073600 Sobic001G387200--Sobic003G129900 Sobic004G093600 Sobic004G093600 Sobic001G387200--Sobic004G093600 Sobic006G120900 Sobic006G120900 Sobic001G387200--Sobic006G120900 Sobic001G387200--Sobic004G173700 Sobic001G387200--Sobic008G018300 Sobic004G256700 Sobic004G256700 Sobic001G387200--Sobic004G256700 Sobic001G387200--Sobic002G255400 Sobic001G387200--Sobic002G420600 Sobic005G019100 Sobic005G019100 Sobic001G387200--Sobic005G019100 Sobic003G137600 Sobic003G137600 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic004G173700--Sobic002G420600 Sobic004G173700--Sobic001G387200 Sobic001G365700 Sobic001G365700 Sobic004G173700--Sobic001G365700 Sobic004G173700--Sobic003G129900 Sobic007G212100 Sobic007G212100 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic004G173700--Sobic008G018300 Sobic002G420600--Sobic003G089100 Sobic002G420600--Sobic004G173700 Sobic002G420600--Sobic006G120900 Sobic002G420600--Sobic003G201500 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic002G420600--Sobic001G303900 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200 Sobic003G260600--Sobic002G255400 Sobic003G260600--Sobic003G201500 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G260600--Sobic003G372200 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic003G260600--Sobic007G014700 Sobic001G282200--Sobic003G260600 Sobic001G282200--Sobic002G420600 Sobic001G282200--Sobic003G089100 Sobic001G282200--Sobic003G201500 Sobic001G282200--Sobic002G255400 Sobic001G282200--Sobic008G018300 Sobic002G397900 Sobic002G397900 Sobic001G282200--Sobic002G397900 Sobic001G282200--Sobic003G013700 Sobic004G100100 Sobic004G100100 Sobic001G282200--Sobic004G100100 Sobic003G129900--Sobic001G387200 Sobic003G129900--Sobic004G093600 Sobic003G129900--Sobic006G120900 Sobic003G129900--Sobic005G019100 Sobic003G129900--Sobic004G173700 Sobic003G129900--Sobic004G256700 Sobic003G129900--Sobic002G420600 Sobic003G034900 Sobic003G034900 Sobic003G129900--Sobic003G034900 Sobic001G518500 Sobic001G518500 Sobic003G129900--Sobic001G518500 Sobic003G016300--Sobic002G352200 Sobic002G217500 Sobic002G217500 Sobic003G016300--Sobic002G217500 Sobic001G192700 Sobic001G192700 Sobic003G016300--Sobic001G192700 Sobic001G219800 Sobic001G219800 Sobic003G016300--Sobic001G219800 Sobic003G016300--Sobic008G018300 Sobic006G203900 Sobic006G203900 Sobic003G016300--Sobic006G203900 Sobic003G016300--Sobic002G255400 Sobic009G211900 Sobic009G211900 Sobic003G016300--Sobic009G211900 Sobic003G016300--Sobic002G420600
Octagon: transcription factors


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