Gene annotation
Transcriptome id Sobic.004G100100.3
Synonym Sb04g008190
Functional annotation expressed protein
UniProt A0A1Z5RLQ7
Pfam -
Panther DB PTHR33156 PTHR33156:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11630 : -
RAP-DB (Rice) LOC_Os02g13630.1 : expressed protein
MaizeGDB (Corn) Zm00025a034521
Brachypodium KQJ94136
Barley -
Wheat TraesCS6D02G180300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G260600 ATP synthase, putative, expressed K02133: ATPeF1B, ATP5B, F-type H+-transporting ATPase subunit beta
2 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
3 Sobic.003G284100 expressed protein -
4 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
5 Sobic.001G282200 ribosomal protein L35, putative, expressed -
6 Sobic.006G153200 OsClp7 - Putative Clp protease homologue, expressed K01358: clpP, ATP-dependent Clp protease, protease subunit
7 Sobic.008G018300 expressed protein K17402: small subunit ribosomal protein S23
8 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
9 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
10 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
11 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
12 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -
13 Sobic.003G201500 outer mitochondrial membrane porin, putative, expressed K15040: voltage-dependent anion channel protein 2
14 Sobic.002G352200 succinyl-CoA ligase subunit alpha-2, mitochondrial precursor, putative, expressed K01899: succinyl-CoA synthetase alpha subunit
15 Sobic.004G173700 SLL1 protein, putative, expressed -
16 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
17 Sobic.003G202400 expressed protein -
18 Sobic.002G186500 UPF0041 domain containing protein, putative, expressed -
19 Sobic.008G149500 expressed protein -
20 Sobic.010G231700 expressed protein -


Gene co-expression network
sample Sobic004G100100 Sobic004G100100 Sobic003G260600 Sobic003G260600 Sobic004G100100--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic004G100100--Sobic002G255400 Sobic003G284100 Sobic003G284100 Sobic004G100100--Sobic003G284100 Sobic007G014700 Sobic007G014700 Sobic004G100100--Sobic007G014700 Sobic001G282200 Sobic001G282200 Sobic004G100100--Sobic001G282200 Sobic006G153200 Sobic006G153200 Sobic004G100100--Sobic006G153200 Sobic008G018300 Sobic008G018300 Sobic004G100100--Sobic008G018300 Sobic003G013700 Sobic003G013700 Sobic004G100100--Sobic003G013700 Sobic001G309200 Sobic001G309200 Sobic004G100100--Sobic001G309200 Sobic003G260600--Sobic002G255400 Sobic003G201500 Sobic003G201500 Sobic003G260600--Sobic003G201500 Sobic003G089100 Sobic003G089100 Sobic003G260600--Sobic003G089100 Sobic008G132200 Sobic008G132200 Sobic003G260600--Sobic008G132200 Sobic001G378800 Sobic001G378800 Sobic003G260600--Sobic001G378800 Sobic003G372200 Sobic003G372200 Sobic003G260600--Sobic003G372200 Sobic002G420600 Sobic002G420600 Sobic003G260600--Sobic002G420600 Sobic008G072500 Sobic008G072500 Sobic003G260600--Sobic008G072500 Sobic003G260600--Sobic007G014700 Sobic002G255400--Sobic003G260600 Sobic002G255400--Sobic003G089100 Sobic002G255400--Sobic007G014700 Sobic002G255400--Sobic008G018300 Sobic002G255400--Sobic002G420600 Sobic002G255400--Sobic003G201500 Sobic002G255400--Sobic003G013700 Sobic002G352200 Sobic002G352200 Sobic002G255400--Sobic002G352200 Sobic001G387200 Sobic001G387200 Sobic002G255400--Sobic001G387200 Sobic003G212000 Sobic003G212000 Sobic003G284100--Sobic003G212000 Sobic002G113200 Sobic002G113200 Sobic003G284100--Sobic002G113200 Sobic003G284100--Sobic003G013700 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic004G279200 Sobic004G279200 Sobic003G284100--Sobic004G279200 Sobic004G247500 Sobic004G247500 Sobic003G284100--Sobic004G247500 Sobic009G157800 Sobic009G157800 Sobic003G284100--Sobic009G157800 Sobic003G137600 Sobic003G137600 Sobic003G284100--Sobic003G137600 Sobic004G261800 Sobic004G261800 Sobic007G014700--Sobic004G261800 Sobic007G014700--Sobic002G255400 Sobic007G014700--Sobic003G089100 Sobic007G014700--Sobic003G013700 Sobic007G014700--Sobic003G260600 Sobic007G014700--Sobic002G420600 Sobic007G014700--Sobic003G284100 Sobic007G014700--Sobic002G352200 Sobic001G303900 Sobic001G303900 Sobic007G014700--Sobic001G303900 Sobic001G282200--Sobic003G260600 Sobic001G282200--Sobic002G420600 Sobic001G282200--Sobic003G089100 Sobic001G282200--Sobic003G201500 Sobic001G282200--Sobic002G255400 Sobic001G282200--Sobic008G018300 Sobic002G397900 Sobic002G397900 Sobic001G282200--Sobic002G397900 Sobic001G282200--Sobic003G013700 Sobic001G282200--Sobic004G100100 Sobic009G218000 Sobic009G218000 Sobic006G153200--Sobic009G218000 Sobic002G217500 Sobic002G217500 Sobic006G153200--Sobic002G217500 Sobic006G153200--Sobic004G100100 Sobic003G075200 Sobic003G075200 Sobic006G153200--Sobic003G075200 Sobic003G167000 Sobic003G167000 Sobic006G153200--Sobic003G167000 Sobic009G107200 Sobic009G107200 Sobic006G153200--Sobic009G107200 Sobic003G113400 Sobic003G113400 Sobic006G153200--Sobic003G113400 Sobic006G153200--Sobic003G260600 Sobic008G011800 Sobic008G011800 Sobic006G153200--Sobic008G011800 Sobic008G018300--Sobic002G255400 Sobic008G018300--Sobic002G352200 Sobic008G018300--Sobic001G387200 Sobic004G173700 Sobic004G173700 Sobic008G018300--Sobic004G173700 Sobic008G018300--Sobic002G420600 Sobic008G018300--Sobic003G260600 Sobic008G018300--Sobic001G282200 Sobic003G129900 Sobic003G129900 Sobic008G018300--Sobic003G129900 Sobic003G016300 Sobic003G016300 Sobic008G018300--Sobic003G016300 Sobic003G013700--Sobic004G261800 Sobic005G050400 Sobic005G050400 Sobic003G013700--Sobic005G050400 Sobic001G072000 Sobic001G072000 Sobic003G013700--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic003G013700--Sobic008G156600 Sobic003G013700--Sobic003G089100 Sobic009G163100 Sobic009G163100 Sobic003G013700--Sobic009G163100 Sobic001G322400 Sobic001G322400 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic001G112600 Sobic001G112600 Sobic003G013700--Sobic001G112600 Sobic002G348400 Sobic002G348400 Sobic001G309200--Sobic002G348400 Sobic001G188000 Sobic001G188000 Sobic001G309200--Sobic001G188000 Sobic001G309200--Sobic003G260600 Sobic001G117900 Sobic001G117900 Sobic001G309200--Sobic001G117900 Sobic009G066200 Sobic009G066200 Sobic001G309200--Sobic009G066200 Sobic002G308000 Sobic002G308000 Sobic001G309200--Sobic002G308000 Sobic002G392400 Sobic002G392400 Sobic001G309200--Sobic002G392400 Sobic010G153400 Sobic010G153400 Sobic001G309200--Sobic010G153400 Sobic007G086600 Sobic007G086600 Sobic001G309200--Sobic007G086600
Octagon: transcription factors


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