Gene annotation
Transcriptome id Sobic.003G202400.1
Synonym Sb03g026450
Functional annotation expressed protein
UniProt C5XPH9
Pfam -
Panther DB PTHR34970 PTHR34970:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G53650 : -
RAP-DB (Rice) LOC_Os01g40650.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G089100 WD domain, G-beta repeat domain containing protein, expressed -
2 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
3 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
4 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
5 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
6 Sobic.002G345000 expressed protein -
7 Sobic.003G284100 expressed protein -
8 Sobic.003G013700 vacuolar ATP synthase subunit E, putative, expressed K02150: ATPeV1E, V-type H+-transporting ATPase subunit E
9 Sobic.007G014700 Fructokinase-2 (Zm)(PubMedID : 27208977)@kinase, pfkB family, putative, expressed K00847: E2.7.1.4, fructokinase
10 Sobic.004G173700 SLL1 protein, putative, expressed -
11 Sobic.009G157800 transporter family protein, putative, expressed -
12 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -
13 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
15 Sobic.005G050400 syntaxin 6, putative, expressed -
16 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
17 Sobic.005G144000 glycosyltransferase, putative, expressed -
18 Sobic.004G007400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
19 Sobic.002G255400 peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K09569: FK506-binding protein 2
20 Sobic.003G040700 choline/ethanolamine kinase, putative, expressed K14156: choline/ethanolamine kinase


Gene co-expression network
sample Sobic003G202400 Sobic003G202400 Sobic003G089100 Sobic003G089100 Sobic003G202400--Sobic003G089100 Sobic003G212000 Sobic003G212000 Sobic003G202400--Sobic003G212000 Sobic002G420600 Sobic002G420600 Sobic003G202400--Sobic002G420600 Sobic003G137600 Sobic003G137600 Sobic003G202400--Sobic003G137600 Sobic003G234500 Sobic003G234500 Sobic003G202400--Sobic003G234500 Sobic002G345000 Sobic002G345000 Sobic003G202400--Sobic002G345000 Sobic003G284100 Sobic003G284100 Sobic003G202400--Sobic003G284100 Sobic003G013700 Sobic003G013700 Sobic003G202400--Sobic003G013700 Sobic007G014700 Sobic007G014700 Sobic003G202400--Sobic007G014700 Sobic003G201500 Sobic003G201500 Sobic003G089100--Sobic003G201500 Sobic003G089100--Sobic003G013700 Sobic003G260600 Sobic003G260600 Sobic003G089100--Sobic003G260600 Sobic002G255400 Sobic002G255400 Sobic003G089100--Sobic002G255400 Sobic004G113600 Sobic004G113600 Sobic003G089100--Sobic004G113600 Sobic001G400000 Sobic001G400000 Sobic003G089100--Sobic001G400000 Sobic003G089100--Sobic002G420600 Sobic005G050400 Sobic005G050400 Sobic003G089100--Sobic005G050400 Sobic001G356200 Sobic001G356200 Sobic003G089100--Sobic001G356200 Sobic003G212000--Sobic003G234500 Sobic008G071300 Sobic008G071300 Sobic003G212000--Sobic008G071300 Sobic002G113200 Sobic002G113200 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic009G189700 Sobic009G189700 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic002G420600--Sobic003G089100 Sobic004G173700 Sobic004G173700 Sobic002G420600--Sobic004G173700 Sobic006G120900 Sobic006G120900 Sobic002G420600--Sobic006G120900 Sobic002G420600--Sobic003G201500 Sobic002G352200 Sobic002G352200 Sobic002G420600--Sobic002G352200 Sobic002G420600--Sobic002G255400 Sobic001G303900 Sobic001G303900 Sobic002G420600--Sobic001G303900 Sobic002G420600--Sobic003G260600 Sobic003G372200 Sobic003G372200 Sobic002G420600--Sobic003G372200 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic003G137600--Sobic002G113200 Sobic001G365700 Sobic001G365700 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic003G234500--Sobic005G144000 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic002G345000--Sobic003G202400 Sobic002G345000--Sobic003G137600 Sobic007G219500 Sobic007G219500 Sobic002G345000--Sobic007G219500 Sobic002G345000--Sobic003G212000 Sobic010G225201 Sobic010G225201 Sobic002G345000--Sobic010G225201 Sobic004G100100 Sobic004G100100 Sobic002G345000--Sobic004G100100 Sobic002G345000--Sobic004G173700 Sobic002G345000--Sobic003G284100 Sobic004G165200 Sobic004G165200 Sobic002G345000--Sobic004G165200 Sobic003G284100--Sobic003G212000 Sobic003G284100--Sobic002G113200 Sobic003G284100--Sobic003G013700 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic004G279200 Sobic004G279200 Sobic003G284100--Sobic004G279200 Sobic004G247500 Sobic004G247500 Sobic003G284100--Sobic004G247500 Sobic009G157800 Sobic009G157800 Sobic003G284100--Sobic009G157800 Sobic003G284100--Sobic003G137600 Sobic004G261800 Sobic004G261800 Sobic003G013700--Sobic004G261800 Sobic003G013700--Sobic005G050400 Sobic001G072000 Sobic001G072000 Sobic003G013700--Sobic001G072000 Sobic008G156600 Sobic008G156600 Sobic003G013700--Sobic008G156600 Sobic003G013700--Sobic003G089100 Sobic009G163100 Sobic009G163100 Sobic003G013700--Sobic009G163100 Sobic001G322400 Sobic001G322400 Sobic003G013700--Sobic001G322400 Sobic002G172401 Sobic002G172401 Sobic003G013700--Sobic002G172401 Sobic001G112600 Sobic001G112600 Sobic003G013700--Sobic001G112600 Sobic007G014700--Sobic004G261800 Sobic007G014700--Sobic002G255400 Sobic007G014700--Sobic003G089100 Sobic007G014700--Sobic003G013700 Sobic007G014700--Sobic003G260600 Sobic007G014700--Sobic002G420600 Sobic007G014700--Sobic003G284100 Sobic007G014700--Sobic002G352200 Sobic007G014700--Sobic001G303900
Octagon: transcription factors


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