Gene annotation
Transcriptome id Sobic.002G113200.1
Synonym Sb02g009670
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5X4A6
Pfam PF10914
Panther DB PTHR31204 PTHR31204:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G32380 : Transmembrane protein 97, predicted
RAP-DB (Rice) LOC_Os07g27450.1 : expressed protein
MaizeGDB (Corn) Zm00025a045709
Brachypodium KQJ90991
Barley HORVU5Hr1G105780.2 , HORVU5Hr1G105780.4 , HORVU5Hr1G105780.5 , HORVU5Hr1G105820.1 , HORVU5Hr1G105780.3
Wheat TraesCS5B02G440800 , TraesCS5D02G445200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
2 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
3 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
4 Sobic.009G157800 transporter family protein, putative, expressed -
5 Sobic.004G279200 protein phosphatase 2C, putative, expressed K01102: pyruvate dehydrogenase phosphatase
6 Sobic.001G503600 expressed protein -
7 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.003G284100 expressed protein -
9 Sobic.010G043250 - -
10 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
11 Sobic.009G189700 - -
12 Sobic.005G144000 glycosyltransferase, putative, expressed -
13 Sobic.002G308900 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
14 Sobic.002G389600 transcription regulator, putative, expressed -
15 Sobic.001G265100 - -
16 Sobic.003G110932 - -
17 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
18 Sobic.001G414650 - K08678: UXS1, UDP-glucuronate decarboxylase
19 Sobic.006G070564 - K01193: INV, beta-fructofuranosidase
20 Sobic.008G050900 expressed protein -


Gene co-expression network
sample Sobic002G113200 Sobic002G113200 Sobic003G212000 Sobic003G212000 Sobic002G113200--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic002G113200--Sobic008G071300 Sobic003G234500 Sobic003G234500 Sobic002G113200--Sobic003G234500 Sobic009G157800 Sobic009G157800 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic001G503600 Sobic001G503600 Sobic002G113200--Sobic001G503600 Sobic006G267100 Sobic006G267100 Sobic002G113200--Sobic006G267100 Sobic003G284100 Sobic003G284100 Sobic002G113200--Sobic003G284100 Sobic010G043250 Sobic010G043250 Sobic002G113200--Sobic010G043250 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic003G212000--Sobic006G267100 Sobic009G189700 Sobic009G189700 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic002G283200 Sobic002G283200 Sobic008G071300--Sobic002G283200 Sobic003G290500 Sobic003G290500 Sobic008G071300--Sobic003G290500 Sobic001G039100 Sobic001G039100 Sobic008G071300--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic008G071300--Sobic002G340600 Sobic006G105100 Sobic006G105100 Sobic008G071300--Sobic006G105100 Sobic008G071300--Sobic001G503600 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic003G234500--Sobic005G144000 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic009G157800--Sobic005G144000 Sobic009G157800--Sobic008G071300 Sobic004G154100 Sobic004G154100 Sobic009G157800--Sobic004G154100 Sobic009G157800--Sobic008G122800 Sobic009G157800--Sobic001G039100 Sobic009G157800--Sobic004G180100 Sobic009G157800--Sobic001G503600 Sobic009G157800--Sobic003G212000 Sobic009G157800--Sobic002G170100 Sobic001G072000 Sobic001G072000 Sobic004G279200--Sobic001G072000 Sobic006G070564 Sobic006G070564 Sobic004G279200--Sobic006G070564 Sobic005G050400 Sobic005G050400 Sobic004G279200--Sobic005G050400 Sobic001G322400 Sobic001G322400 Sobic004G279200--Sobic001G322400 Sobic001G414650 Sobic001G414650 Sobic004G279200--Sobic001G414650 Sobic004G062200 Sobic004G062200 Sobic004G279200--Sobic004G062200 Sobic004G279200--Sobic006G267100 Sobic006G171600 Sobic006G171600 Sobic004G279200--Sobic006G171600 Sobic001G112600 Sobic001G112600 Sobic004G279200--Sobic001G112600 Sobic001G503600--Sobic001G414650 Sobic001G503600--Sobic008G071300 Sobic001G503600--Sobic005G144000 Sobic009G242200 Sobic009G242200 Sobic001G503600--Sobic009G242200 Sobic001G503600--Sobic002G170100 Sobic001G503600--Sobic001G039100 Sobic001G503600--Sobic002G340600 Sobic002G380300 Sobic002G380300 Sobic001G503600--Sobic002G380300 Sobic002G404600 Sobic002G404600 Sobic001G503600--Sobic002G404600 Sobic006G267100--Sobic008G071300 Sobic006G267100--Sobic001G414650 Sobic006G267100--Sobic002G340600 Sobic006G267100--Sobic003G114600 Sobic006G267100--Sobic002G283200 Sobic006G267100--Sobic006G105100 Sobic004G042501 Sobic004G042501 Sobic006G267100--Sobic004G042501 Sobic006G267100--Sobic002G380300 Sobic006G267100--Sobic003G290500 Sobic003G284100--Sobic003G212000 Sobic003G284100--Sobic002G113200 Sobic003G013700 Sobic003G013700 Sobic003G284100--Sobic003G013700 Sobic003G089100 Sobic003G089100 Sobic003G284100--Sobic003G089100 Sobic003G284100--Sobic006G070564 Sobic003G284100--Sobic004G279200 Sobic004G247500 Sobic004G247500 Sobic003G284100--Sobic004G247500 Sobic003G284100--Sobic009G157800 Sobic003G137600 Sobic003G137600 Sobic003G284100--Sobic003G137600 Sobic010G043250--Sobic002G113200 Sobic003G133100 Sobic003G133100 Sobic010G043250--Sobic003G133100 Sobic010G043250--Sobic003G212000 Sobic005G039900 Sobic005G039900 Sobic010G043250--Sobic005G039900 Sobic010G043250--Sobic003G234500 Sobic007G138100 Sobic007G138100 Sobic010G043250--Sobic007G138100 Sobic010G043250--Sobic003G137600 Sobic010G043250--Sobic008G071300 Sobic004G127000 Sobic004G127000 Sobic010G043250--Sobic004G127000
Octagon: transcription factors


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