Gene annotation
Transcriptome id Sobic.009G189700.1
Synonym
Functional annotation -
UniProt A0A1B6P984
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.009G189700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G144000 glycosyltransferase, putative, expressed -
2 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
3 Sobic.001G503600 expressed protein -
4 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
5 Sobic.006G272400 tentative name(PubMedID : 31536532)@core histone H2A/H2B/H3/H4, putative, expressed -
6 Sobic.001G039100 oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed -
7 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
8 Sobic.003G441000 rhoGAP domain containing protein, expressed -
9 Sobic.005G042900 expressed protein -
10 Sobic.002G308900 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
11 Sobic.005G049200 exo70 exocyst complex subunit, putative, expressed -
12 Sobic.005G054150 - -
13 Sobic.002G404600 expressed protein -
14 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
15 Sobic.004G154100 OsFBX346 - F-box domain containing protein, expressed -
16 Sobic.004G120500 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
17 Sobic.002G381500 uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed K01087: trehalose 6-phosphate phosphatase
18 Sobic.008G122800 Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed -
19 Sobic.004G318900 stage II sporulation protein E, putative, expressed -
20 Sobic.006G267100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic009G189700 Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic009G189700--Sobic005G144000 Sobic002G170100 Sobic002G170100 Sobic009G189700--Sobic002G170100 Sobic001G503600 Sobic001G503600 Sobic009G189700--Sobic001G503600 Sobic008G071300 Sobic008G071300 Sobic009G189700--Sobic008G071300 Sobic006G272400 Sobic006G272400 Sobic009G189700--Sobic006G272400 Sobic001G039100 Sobic001G039100 Sobic009G189700--Sobic001G039100 Sobic009G242200 Sobic009G242200 Sobic009G189700--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic009G189700--Sobic003G441000 Sobic005G042900 Sobic005G042900 Sobic009G189700--Sobic005G042900 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic001G279000 Sobic001G279000 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic002G170100--Sobic009G242200 Sobic002G380300 Sobic002G380300 Sobic002G170100--Sobic002G380300 Sobic005G170400 Sobic005G170400 Sobic002G170100--Sobic005G170400 Sobic004G358000 Sobic004G358000 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic003G290500 Sobic003G290500 Sobic002G170100--Sobic003G290500 Sobic003G304600 Sobic003G304600 Sobic002G170100--Sobic003G304600 Sobic002G170100--Sobic005G144000 Sobic002G283200 Sobic002G283200 Sobic002G170100--Sobic002G283200 Sobic001G414650 Sobic001G414650 Sobic001G503600--Sobic001G414650 Sobic001G503600--Sobic008G071300 Sobic001G503600--Sobic005G144000 Sobic001G503600--Sobic009G242200 Sobic001G503600--Sobic002G170100 Sobic001G503600--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic001G503600--Sobic002G340600 Sobic001G503600--Sobic002G380300 Sobic001G503600--Sobic002G404600 Sobic006G267100 Sobic006G267100 Sobic008G071300--Sobic006G267100 Sobic008G071300--Sobic002G170100 Sobic003G114600 Sobic003G114600 Sobic008G071300--Sobic003G114600 Sobic008G071300--Sobic002G283200 Sobic008G071300--Sobic003G290500 Sobic008G071300--Sobic001G039100 Sobic008G071300--Sobic002G340600 Sobic006G105100 Sobic006G105100 Sobic008G071300--Sobic006G105100 Sobic008G071300--Sobic001G503600 Sobic001G202900 Sobic001G202900 Sobic006G272400--Sobic001G202900 Sobic009G165900 Sobic009G165900 Sobic006G272400--Sobic009G165900 Sobic004G158100 Sobic004G158100 Sobic006G272400--Sobic004G158100 Sobic001G222800 Sobic001G222800 Sobic006G272400--Sobic001G222800 Sobic008G075800 Sobic008G075800 Sobic006G272400--Sobic008G075800 Sobic003G286000 Sobic003G286000 Sobic006G272400--Sobic003G286000 Sobic004G336401 Sobic004G336401 Sobic006G272400--Sobic004G336401 Sobic008G097800 Sobic008G097800 Sobic006G272400--Sobic008G097800 Sobic002G145400 Sobic002G145400 Sobic006G272400--Sobic002G145400 Sobic001G039100--Sobic002G404600 Sobic007G196700 Sobic007G196700 Sobic001G039100--Sobic007G196700 Sobic002G381500 Sobic002G381500 Sobic001G039100--Sobic002G381500 Sobic002G308900 Sobic002G308900 Sobic001G039100--Sobic002G308900 Sobic009G110600 Sobic009G110600 Sobic001G039100--Sobic009G110600 Sobic001G039100--Sobic006G105100 Sobic001G039100--Sobic002G380300 Sobic001G039100--Sobic001G414650 Sobic004G290500 Sobic004G290500 Sobic001G039100--Sobic004G290500 Sobic009G242200--Sobic002G170100 Sobic009G242200--Sobic003G290500 Sobic009G242200--Sobic002G380300 Sobic006G115700 Sobic006G115700 Sobic009G242200--Sobic006G115700 Sobic009G242200--Sobic003G304600 Sobic009G242200--Sobic004G358000 Sobic007G091400 Sobic007G091400 Sobic009G242200--Sobic007G091400 Sobic003G297100 Sobic003G297100 Sobic009G242200--Sobic003G297100 Sobic001G370400 Sobic001G370400 Sobic009G242200--Sobic001G370400 Sobic003G441000--Sobic005G144000 Sobic001G112600 Sobic001G112600 Sobic003G441000--Sobic001G112600 Sobic003G441000--Sobic002G170100 Sobic003G441000--Sobic009G242200 Sobic003G441000--Sobic001G279000 Sobic003G441000--Sobic004G358000 Sobic003G441000--Sobic003G290500 Sobic008G055200 Sobic008G055200 Sobic003G441000--Sobic008G055200 Sobic003G441000--Sobic005G170400 Sobic005G042900--Sobic006G272400 Sobic005G042900--Sobic001G202900 Sobic005G042900--Sobic003G286000 Sobic005G042900--Sobic009G165900 Sobic005G042900--Sobic004G158100 Sobic001G024700 Sobic001G024700 Sobic005G042900--Sobic001G024700 Sobic001G364700 Sobic001G364700 Sobic005G042900--Sobic001G364700 Sobic005G042900--Sobic001G222800 Sobic005G042900--Sobic008G075800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.