Gene annotation
Transcriptome id Sobic.004G120500.1
Synonym Sb04g010030
Functional annotation aldose 1-epimerase, putative, expressed
UniProt C5XZM6
Pfam PF01263
Panther DB PTHR10091 PTHR10091:SF13
NCBI CDD KOG1604; Predicted mutarotase
KEGG Orthology K01785; galM, aldose 1-epimerase
Gene Ontology GO:0016853; isomerase activity GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT5G15140 : Galactose mutarotase-like superfamily protein
RAP-DB (Rice) LOC_Os04g38540.1 : aldose 1-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a020797 , Zm00025a011134 , Zm00025a011133 , Zm00025a056196
Brachypodium KQJ82953 , KQJ82956
Barley HORVU3Hr1G091280.1 , HORVU2Hr1G080190.2 , HORVU5Hr1G014580.1 , HORVU2Hr1G080190.1 , HORVU2Hr1G080070.3 , HORVU2Hr1G080070.2
Wheat TraesCS3A02G408400 , TraesCS2A02G343600 , TraesCS2A02G343600 , TraesCS3B02G442100 , TraesCS2B02G341200 , TraesCS2A02G344000 , TraesCS3D02G403500 , TraesCS3D02G403500 , TraesCS2B02G341300 , TraesCS2D02G322100 , TraesCS2B02G341000 , TraesCS2D02G322200 , TraesCS2B02G341300 , TraesCS2B02G341400 , TraesCS2B02G341400 , TraesCS2B02G341500 , TraesCS2D02G322300 , TraesCS2A02G343800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
2 Sobic.009G189700 - -
3 Sobic.008G055600 OsFBX430 - F-box domain containing protein, expressed -
4 Sobic.005G144000 glycosyltransferase, putative, expressed -
5 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
6 Sobic.003G187700 polygalacturonase, putative, expressed -
7 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
8 Sobic.001G503600 expressed protein -
9 Sobic.009G119600 powdery mildew resistant protein 5, putative, expressed -
10 Sobic.003G110932 - -
11 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
12 Sobic.003G441000 rhoGAP domain containing protein, expressed -
13 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
14 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
15 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
16 Sobic.006G168200 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
17 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
18 Sobic.005G050400 syntaxin 6, putative, expressed -
19 Sobic.001G183633 - -
20 Sobic.004G154100 OsFBX346 - F-box domain containing protein, expressed -


Gene co-expression network
sample Sobic004G120500 Sobic004G120500 Sobic004G253200 Sobic004G253200 Sobic004G120500--Sobic004G253200 Sobic009G189700 Sobic009G189700 Sobic004G120500--Sobic009G189700 Sobic008G055600 Sobic008G055600 Sobic004G120500--Sobic008G055600 Sobic005G144000 Sobic005G144000 Sobic004G120500--Sobic005G144000 Sobic001G350100 Sobic001G350100 Sobic004G120500--Sobic001G350100 Sobic003G187700 Sobic003G187700 Sobic004G120500--Sobic003G187700 Sobic002G170100 Sobic002G170100 Sobic004G120500--Sobic002G170100 Sobic001G503600 Sobic001G503600 Sobic004G120500--Sobic001G503600 Sobic009G119600 Sobic009G119600 Sobic004G120500--Sobic009G119600 Sobic004G253200--Sobic008G055600 Sobic004G253200--Sobic003G187700 Sobic004G253200--Sobic009G119600 Sobic010G189432 Sobic010G189432 Sobic004G253200--Sobic010G189432 Sobic004G253200--Sobic004G120500 Sobic001G342101 Sobic001G342101 Sobic004G253200--Sobic001G342101 Sobic004G253200--Sobic005G144000 Sobic001G213666 Sobic001G213666 Sobic004G253200--Sobic001G213666 Sobic001G279000 Sobic001G279000 Sobic004G253200--Sobic001G279000 Sobic009G189700--Sobic005G144000 Sobic009G189700--Sobic002G170100 Sobic009G189700--Sobic001G503600 Sobic008G071300 Sobic008G071300 Sobic009G189700--Sobic008G071300 Sobic006G272400 Sobic006G272400 Sobic009G189700--Sobic006G272400 Sobic001G039100 Sobic001G039100 Sobic009G189700--Sobic001G039100 Sobic009G242200 Sobic009G242200 Sobic009G189700--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic009G189700--Sobic003G441000 Sobic005G042900 Sobic005G042900 Sobic009G189700--Sobic005G042900 Sobic008G055600--Sobic004G253200 Sobic008G055600--Sobic001G279000 Sobic008G055600--Sobic005G144000 Sobic008G055600--Sobic009G119600 Sobic008G055600--Sobic001G342101 Sobic008G055600--Sobic003G187700 Sobic003G244400 Sobic003G244400 Sobic008G055600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic008G055600--Sobic004G358000 Sobic008G055600--Sobic003G441000 Sobic005G144000--Sobic003G441000 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic005G144000--Sobic001G279000 Sobic005G144000--Sobic009G242200 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic001G350100--Sobic004G120500 Sobic001G350100--Sobic005G144000 Sobic001G350100--Sobic004G253200 Sobic001G350100--Sobic003G187700 Sobic001G350100--Sobic008G055600 Sobic003G234500 Sobic003G234500 Sobic001G350100--Sobic003G234500 Sobic001G350100--Sobic002G170100 Sobic001G350100--Sobic009G189700 Sobic001G350100--Sobic008G122800 Sobic003G187700--Sobic004G253200 Sobic003G187700--Sobic008G055600 Sobic003G187700--Sobic010G189432 Sobic003G187700--Sobic001G342101 Sobic003G187700--Sobic009G119600 Sobic003G187700--Sobic001G213666 Sobic003G187700--Sobic005G144000 Sobic003G187700--Sobic004G120500 Sobic003G187700--Sobic001G279000 Sobic002G170100--Sobic009G242200 Sobic002G380300 Sobic002G380300 Sobic002G170100--Sobic002G380300 Sobic005G170400 Sobic005G170400 Sobic002G170100--Sobic005G170400 Sobic002G170100--Sobic004G358000 Sobic003G218100 Sobic003G218100 Sobic002G170100--Sobic003G218100 Sobic003G290500 Sobic003G290500 Sobic002G170100--Sobic003G290500 Sobic003G304600 Sobic003G304600 Sobic002G170100--Sobic003G304600 Sobic002G170100--Sobic005G144000 Sobic002G283200 Sobic002G283200 Sobic002G170100--Sobic002G283200 Sobic001G414650 Sobic001G414650 Sobic001G503600--Sobic001G414650 Sobic001G503600--Sobic008G071300 Sobic001G503600--Sobic005G144000 Sobic001G503600--Sobic009G242200 Sobic001G503600--Sobic002G170100 Sobic001G503600--Sobic001G039100 Sobic002G340600 Sobic002G340600 Sobic001G503600--Sobic002G340600 Sobic001G503600--Sobic002G380300 Sobic001G503600--Sobic002G404600 Sobic009G119600--Sobic004G253200 Sobic009G119600--Sobic008G055600 Sobic009G119600--Sobic010G189432 Sobic009G119600--Sobic003G187700 Sobic003G013900 Sobic003G013900 Sobic009G119600--Sobic003G013900 Sobic009G119600--Sobic001G279000 Sobic009G119600--Sobic005G144000 Sobic009G119600--Sobic002G170100 Sobic009G119600--Sobic003G244400
Octagon: transcription factors


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