Gene annotation
Transcriptome id Sobic.008G055600.1
Synonym Sb08g004713
Functional annotation OsFBX430 - F-box domain containing protein, expressed
UniProt A0A1B6PBM8
Pfam PF00646
Panther DB PTHR32212 PTHR32212:SF139
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G02910 : F-box/RNI-like superfamily protein
RAP-DB (Rice) LOC_Os11g42230.1 : OsFBX430 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G253200 amino acid transporter, putative, expressed K14207: SLC38A2, solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2
2 Sobic.001G279000 OsFBX382 - F-box domain containing protein, expressed -
3 Sobic.005G144000 glycosyltransferase, putative, expressed -
4 Sobic.009G119600 powdery mildew resistant protein 5, putative, expressed -
5 Sobic.001G342101 - -
6 Sobic.003G187700 polygalacturonase, putative, expressed -
7 Sobic.003G244400 OsFBK1 - F-box domain and kelch repeat containing protein, expressed -
8 Sobic.004G358000 CAMK_CAMK_like.16 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
9 Sobic.003G441000 rhoGAP domain containing protein, expressed -
10 Sobic.002G170100 NAD dependent epimerase/dehydratase family protein, putative, expressed K01784: galE, UDP-glucose 4-epimerase
11 Sobic.003G013900 - -
12 Sobic.001G183633 - -
13 Sobic.001G103100 DNA binding protein, putative, expressed -
14 Sobic.009G242200 CGMC_MAPKCMGC_2.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
15 Sobic.001G112600 Actin(PubMedID : 27325899)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@actin, putative, expressed K10355: actin, other eukaryote
16 Sobic.009G087100 cyclin-A1, putative, expressed K06627: cyclin-A
17 Sobic.005G170400 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
18 Sobic.004G094400 - -
19 Sobic.002G176000 membrane protein, putative, expressed -
20 Sobic.007G074300 MATE efflux family protein, putative, expressed -


Gene co-expression network
sample Sobic008G055600 Sobic008G055600 Sobic004G253200 Sobic004G253200 Sobic008G055600--Sobic004G253200 Sobic001G279000 Sobic001G279000 Sobic008G055600--Sobic001G279000 Sobic005G144000 Sobic005G144000 Sobic008G055600--Sobic005G144000 Sobic009G119600 Sobic009G119600 Sobic008G055600--Sobic009G119600 Sobic001G342101 Sobic001G342101 Sobic008G055600--Sobic001G342101 Sobic003G187700 Sobic003G187700 Sobic008G055600--Sobic003G187700 Sobic003G244400 Sobic003G244400 Sobic008G055600--Sobic003G244400 Sobic004G358000 Sobic004G358000 Sobic008G055600--Sobic004G358000 Sobic003G441000 Sobic003G441000 Sobic008G055600--Sobic003G441000 Sobic004G253200--Sobic008G055600 Sobic004G253200--Sobic003G187700 Sobic004G253200--Sobic009G119600 Sobic010G189432 Sobic010G189432 Sobic004G253200--Sobic010G189432 Sobic004G120500 Sobic004G120500 Sobic004G253200--Sobic004G120500 Sobic004G253200--Sobic001G342101 Sobic004G253200--Sobic005G144000 Sobic001G213666 Sobic001G213666 Sobic004G253200--Sobic001G213666 Sobic004G253200--Sobic001G279000 Sobic003G013900 Sobic003G013900 Sobic001G279000--Sobic003G013900 Sobic002G380300 Sobic002G380300 Sobic001G279000--Sobic002G380300 Sobic008G176500 Sobic008G176500 Sobic001G279000--Sobic008G176500 Sobic003G019450 Sobic003G019450 Sobic001G279000--Sobic003G019450 Sobic007G091400 Sobic007G091400 Sobic001G279000--Sobic007G091400 Sobic006G236400 Sobic006G236400 Sobic001G279000--Sobic006G236400 Sobic001G370400 Sobic001G370400 Sobic001G279000--Sobic001G370400 Sobic010G016200 Sobic010G016200 Sobic001G279000--Sobic010G016200 Sobic003G304600 Sobic003G304600 Sobic001G279000--Sobic003G304600 Sobic005G144000--Sobic003G441000 Sobic002G170100 Sobic002G170100 Sobic005G144000--Sobic002G170100 Sobic008G122800 Sobic008G122800 Sobic005G144000--Sobic008G122800 Sobic005G144000--Sobic001G279000 Sobic009G242200 Sobic009G242200 Sobic005G144000--Sobic009G242200 Sobic001G503600 Sobic001G503600 Sobic005G144000--Sobic001G503600 Sobic004G180100 Sobic004G180100 Sobic005G144000--Sobic004G180100 Sobic008G071300 Sobic008G071300 Sobic005G144000--Sobic008G071300 Sobic002G404600 Sobic002G404600 Sobic005G144000--Sobic002G404600 Sobic009G119600--Sobic004G253200 Sobic009G119600--Sobic008G055600 Sobic009G119600--Sobic010G189432 Sobic009G119600--Sobic003G187700 Sobic009G119600--Sobic003G013900 Sobic009G119600--Sobic001G279000 Sobic009G119600--Sobic005G144000 Sobic009G119600--Sobic002G170100 Sobic009G119600--Sobic003G244400 Sobic001G342101--Sobic008G055600 Sobic001G342101--Sobic005G144000 Sobic001G342101--Sobic003G187700 Sobic001G342101--Sobic004G253200 Sobic001G342101--Sobic003G441000 Sobic001G342101--Sobic001G279000 Sobic001G342101--Sobic010G189432 Sobic005G050400 Sobic005G050400 Sobic001G342101--Sobic005G050400 Sobic001G400000 Sobic001G400000 Sobic001G342101--Sobic001G400000 Sobic003G187700--Sobic004G253200 Sobic003G187700--Sobic008G055600 Sobic003G187700--Sobic010G189432 Sobic003G187700--Sobic001G342101 Sobic003G187700--Sobic009G119600 Sobic003G187700--Sobic001G213666 Sobic003G187700--Sobic005G144000 Sobic003G187700--Sobic004G120500 Sobic003G187700--Sobic001G279000 Sobic003G244400--Sobic001G370400 Sobic001G103100 Sobic001G103100 Sobic003G244400--Sobic001G103100 Sobic008G055200 Sobic008G055200 Sobic003G244400--Sobic008G055200 Sobic001G432200 Sobic001G432200 Sobic003G244400--Sobic001G432200 Sobic006G204500 Sobic006G204500 Sobic003G244400--Sobic006G204500 Sobic001G340800 Sobic001G340800 Sobic003G244400--Sobic001G340800 Sobic002G364700 Sobic002G364700 Sobic003G244400--Sobic002G364700 Sobic003G244400--Sobic007G091400 Sobic010G003200 Sobic010G003200 Sobic003G244400--Sobic010G003200 Sobic004G358000--Sobic002G170100 Sobic004G358000--Sobic007G091400 Sobic004G358000--Sobic001G103100 Sobic004G358000--Sobic009G242200 Sobic003G290500 Sobic003G290500 Sobic004G358000--Sobic003G290500 Sobic003G218100 Sobic003G218100 Sobic004G358000--Sobic003G218100 Sobic004G358000--Sobic003G304600 Sobic004G358000--Sobic002G380300 Sobic004G358000--Sobic008G176500 Sobic003G441000--Sobic005G144000 Sobic001G112600 Sobic001G112600 Sobic003G441000--Sobic001G112600 Sobic003G441000--Sobic002G170100 Sobic003G441000--Sobic009G242200 Sobic003G441000--Sobic001G279000 Sobic003G441000--Sobic004G358000 Sobic003G441000--Sobic003G290500 Sobic003G441000--Sobic008G055200 Sobic005G170400 Sobic005G170400 Sobic003G441000--Sobic005G170400
Octagon: transcription factors


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