Gene annotation
| Transcriptome id | Sobic.009G157800.1,Sobic.009G157800.2,Sobic.009G157800.3 |
|---|---|
| Synonym | Sb09g022100 |
| Functional annotation | transporter family protein, putative, expressed |
| UniProt | C5YYV8 |
| Pfam | PF00083 |
| Panther DB | PTHR23500 PTHR23500:SF154 |
| NCBI CDD | KOG0254; Predicted transporter (major facilitator superfamily) |
| KEGG Orthology | - |
| Gene Ontology | GO:0016021; integral component of membrane |
Orthologs (automatic annotation)
| TAIR | AT4G36670 : Major facilitator superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os10g21590.2 : transporter family protein, putative, expressed |
| MaizeGDB (Corn) | Zm00025a003056 , Zm00025a003962 |
| Brachypodium | KQK15520 , KQK15522 , KQK23114 , KQJ89260 , KQK20769 |
| Barley | HORVU5Hr1G106160.1 , HORVU5Hr1G106160.2 , HORVU7Hr1G031650.8 , HORVU7Hr1G031650.4 , HORVU7Hr1G031650.5 , HORVU7Hr1G031650.6 , HORVU7Hr1G031650.7 , HORVU7Hr1G031650.1 , HORVU7Hr1G031650.2 , HORVU7Hr1G031650.3 |
| Wheat | TraesCS1A02G426300 , TraesCS5A02G440100 , TraesCS5D02G447300 , TraesCS4D02G262900 , TraesCS5B02G443900 , TraesCS7D02G154700 , TraesCS7B02G058500 , TraesCS4A02G042100 , TraesCS4A02G042000 , TraesCS7A02G154500 , TraesCS1D02G435800 , TraesCS4D02G263000 , TraesCS4B02G262900 |
| Populus | - |
JBrowse
| Sobic.009G157800 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G144000 | glycosyltransferase, putative, expressed | - |
| 2 | Sobic.008G071300 | protein phosphatase 2C, putative, expressed | K17506: PPM1L, protein phosphatase 1L |
| 3 | Sobic.004G154100 | OsFBX346 - F-box domain containing protein, expressed | - |
| 4 | Sobic.008G122800 | Recombinant SbCYP728B35 catalyzed the conversion of 5DS (5-deoxystrigol) to sorgomol in vitro.(PubMedID : 34970291)@cytochrome P450, putative, expressed | - |
| 5 | Sobic.001G039100 | oxidoreductase, 2OG-Fe oxygenase family protein, putative, expressed | - |
| 6 | Sobic.004G180100 | - | - |
| 7 | Sobic.001G503600 | expressed protein | - |
| 8 | Sobic.003G212000 | OsCML12 - Calmodulin-related calcium sensor protein, expressed | K13448: calcium-binding protein CML |
| 9 | Sobic.002G170100 | NAD dependent epimerase/dehydratase family protein, putative, expressed | K01784: galE, UDP-glucose 4-epimerase |
| 10 | Sobic.006G267100 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 11 | Sobic.003G441000 | rhoGAP domain containing protein, expressed | - |
| 12 | Sobic.008G050900 | expressed protein | - |
| 13 | Sobic.003G234500 | CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed | K01673: cynT, carbonic anhydrase |
| 14 | Sobic.006G070564 | - | K01193: INV, beta-fructofuranosidase |
| 15 | Sobic.001G414650 | - | K08678: UXS1, UDP-glucuronate decarboxylase |
| 16 | Sobic.002G176000 | membrane protein, putative, expressed | - |
| 17 | Sobic.004G318900 | stage II sporulation protein E, putative, expressed | - |
| 18 | Sobic.002G308900 | ubiquitin fusion protein, putative, expressed | K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e |
| 19 | Sobic.002G113200 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 20 | Sobic.002G381500 | uncharacterized glycosyl hydrolase Rv2006/MT2062, putative, expressed | K01087: trehalose 6-phosphate phosphatase |
Gene co-expression network
Octagon: transcription factors
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