Gene annotation
Transcriptome id Sobic.003G137600.1
Synonym Sb03g011710
Functional annotation CHIT10 - Chitinase family protein precursor, expressed
UniProt C5XHZ4
Pfam PF00182
Panther DB PTHR22595 PTHR22595:SF54
NCBI CDD KOG4742; Predicted chitinase
KEGG Orthology -
Gene Ontology GO:0016998; cell wall macromolecule catabolic process GO:0006032chitin catabolic process GO:0004568chitinase activity


Orthologs (automatic annotation)
TAIR AT1G02360 : Chitinase family protein
RAP-DB (Rice) LOC_Os01g18400.1 : CHIT10 - Chitinase family protein precursor, expressed
MaizeGDB (Corn) Zm00025a038131 , Zm00025a035162
Brachypodium -
Barley HORVU1Hr1G017670.1 , HORVU3Hr1G027030.2
Wheat TraesCS3D02G141900 , TraesCS3B02G159700 , TraesCS3A02G312500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G173700 SLL1 protein, putative, expressed -
2 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
3 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
4 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
5 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
7 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.003G284100 expressed protein -
9 Sobic.009G189700 - -
10 Sobic.007G138100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
11 Sobic.003G139200 - -
12 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
13 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
14 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
15 Sobic.002G305200 expressed protein -
16 Sobic.009G157800 transporter family protein, putative, expressed -
17 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
18 Sobic.003G335300 E2F-related protein, putative, expressed -
19 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
20 Sobic.002G228900 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic003G137600 Sobic003G137600 Sobic004G173700 Sobic004G173700 Sobic003G137600--Sobic004G173700 Sobic003G212000 Sobic003G212000 Sobic003G137600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G137600--Sobic003G234500 Sobic006G120900 Sobic006G120900 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic001G365700 Sobic001G365700 Sobic003G137600--Sobic001G365700 Sobic007G212100 Sobic007G212100 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic009G189700 Sobic009G189700 Sobic003G137600--Sobic009G189700 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic003G212000--Sobic003G234500 Sobic008G071300 Sobic008G071300 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic006G267100 Sobic006G267100 Sobic003G212000--Sobic006G267100 Sobic003G212000--Sobic009G189700 Sobic005G144000 Sobic005G144000 Sobic003G212000--Sobic005G144000 Sobic001G503600 Sobic001G503600 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic003G234500--Sobic003G212000 Sobic003G234500--Sobic008G071300 Sobic003G234500--Sobic006G267100 Sobic003G234500--Sobic005G144000 Sobic003G234500--Sobic002G170100 Sobic003G234500--Sobic009G189700 Sobic004G180100 Sobic004G180100 Sobic003G234500--Sobic004G180100 Sobic008G122800 Sobic008G122800 Sobic003G234500--Sobic008G122800 Sobic003G110932 Sobic003G110932 Sobic003G234500--Sobic003G110932 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic006G120900--Sobic003G212000 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic006G120900--Sobic003G137600 Sobic002G113200--Sobic003G212000 Sobic002G113200--Sobic008G071300 Sobic002G113200--Sobic003G234500 Sobic009G157800 Sobic009G157800 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic002G113200--Sobic001G503600 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic010G043250 Sobic010G043250 Sobic002G113200--Sobic010G043250 Sobic003G335300 Sobic003G335300 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G482800 Sobic001G482800 Sobic001G365700--Sobic001G482800 Sobic010G216400 Sobic010G216400 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic004G232500 Sobic004G232500 Sobic001G365700--Sobic004G232500 Sobic001G365700--Sobic010G043250 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic007G212100--Sobic003G137600 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic003G284100--Sobic003G212000 Sobic003G284100--Sobic002G113200 Sobic003G013700 Sobic003G013700 Sobic003G284100--Sobic003G013700 Sobic003G284100--Sobic003G089100 Sobic006G070564 Sobic006G070564 Sobic003G284100--Sobic006G070564 Sobic003G284100--Sobic004G279200 Sobic003G284100--Sobic004G247500 Sobic003G284100--Sobic009G157800 Sobic003G284100--Sobic003G137600 Sobic009G189700--Sobic005G144000 Sobic009G189700--Sobic002G170100 Sobic009G189700--Sobic001G503600 Sobic009G189700--Sobic008G071300 Sobic006G272400 Sobic006G272400 Sobic009G189700--Sobic006G272400 Sobic001G039100 Sobic001G039100 Sobic009G189700--Sobic001G039100 Sobic009G242200 Sobic009G242200 Sobic009G189700--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic009G189700--Sobic003G441000 Sobic005G042900 Sobic005G042900 Sobic009G189700--Sobic005G042900
Octagon: transcription factors


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