Gene annotation
Transcriptome id Sobic.003G139200.1
Synonym
Functional annotation -
UniProt A0A1B6Q330
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G173700 SLL1 protein, putative, expressed -
2 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
3 Sobic.006G120900 dehydrogenase, putative, expressed K00030: isocitrate dehydrogenase (NAD+)
4 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.002G113200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
7 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
8 Sobic.003G212000 OsCML12 - Calmodulin-related calcium sensor protein, expressed K13448: calcium-binding protein CML
9 Sobic.009G189700 - -
10 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase
11 Sobic.004G127000 - -
12 Sobic.004G120500 aldose 1-epimerase, putative, expressed K01785: galM, aldose 1-epimerase
13 Sobic.009G157800 transporter family protein, putative, expressed -
14 Sobic.008G050900 expressed protein -
15 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
16 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
17 Sobic.003G284100 expressed protein -
18 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
19 Sobic.005G144000 glycosyltransferase, putative, expressed -
20 Sobic.008G071300 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L


Gene co-expression network
sample Sobic003G139200 Sobic003G139200 Sobic004G173700 Sobic004G173700 Sobic003G139200--Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic003G139200--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic003G139200--Sobic006G120900 Sobic007G212100 Sobic007G212100 Sobic003G139200--Sobic007G212100 Sobic002G113200 Sobic002G113200 Sobic003G139200--Sobic002G113200 Sobic004G247500 Sobic004G247500 Sobic003G139200--Sobic004G247500 Sobic001G303900 Sobic001G303900 Sobic003G139200--Sobic001G303900 Sobic003G212000 Sobic003G212000 Sobic003G139200--Sobic003G212000 Sobic009G189700 Sobic009G189700 Sobic003G139200--Sobic009G189700 Sobic004G173700--Sobic003G137600 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic001G365700 Sobic001G365700 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic003G137600--Sobic004G173700 Sobic003G137600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic003G137600--Sobic009G189700 Sobic006G120900--Sobic004G173700 Sobic006G120900--Sobic003G234500 Sobic003G089100 Sobic003G089100 Sobic006G120900--Sobic003G089100 Sobic006G120900--Sobic003G129900 Sobic003G380300 Sobic003G380300 Sobic006G120900--Sobic003G380300 Sobic006G120900--Sobic003G212000 Sobic006G120900--Sobic001G387200 Sobic006G120900--Sobic002G420600 Sobic006G120900--Sobic003G137600 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic007G212100--Sobic003G137600 Sobic004G232500 Sobic004G232500 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic007G212100--Sobic003G139200 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic002G113200--Sobic003G212000 Sobic008G071300 Sobic008G071300 Sobic002G113200--Sobic008G071300 Sobic002G113200--Sobic003G234500 Sobic009G157800 Sobic009G157800 Sobic002G113200--Sobic009G157800 Sobic004G279200 Sobic004G279200 Sobic002G113200--Sobic004G279200 Sobic001G503600 Sobic001G503600 Sobic002G113200--Sobic001G503600 Sobic006G267100 Sobic006G267100 Sobic002G113200--Sobic006G267100 Sobic002G113200--Sobic003G284100 Sobic010G043250 Sobic010G043250 Sobic002G113200--Sobic010G043250 Sobic004G247500--Sobic001G303900 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic006G070564 Sobic006G070564 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic008G050900 Sobic008G050900 Sobic004G247500--Sobic008G050900 Sobic005G144000 Sobic005G144000 Sobic004G247500--Sobic005G144000 Sobic005G074300 Sobic005G074300 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600 Sobic001G303900--Sobic004G247500 Sobic001G303900--Sobic009G189700 Sobic005G050400 Sobic005G050400 Sobic001G303900--Sobic005G050400 Sobic004G120500 Sobic004G120500 Sobic001G303900--Sobic004G120500 Sobic003G013700 Sobic003G013700 Sobic001G303900--Sobic003G013700 Sobic001G303900--Sobic005G144000 Sobic001G303900--Sobic003G089100 Sobic001G342101 Sobic001G342101 Sobic001G303900--Sobic001G342101 Sobic001G303900--Sobic002G420600 Sobic003G212000--Sobic003G234500 Sobic003G212000--Sobic008G071300 Sobic003G212000--Sobic002G113200 Sobic003G212000--Sobic006G267100 Sobic003G212000--Sobic009G189700 Sobic003G212000--Sobic005G144000 Sobic003G212000--Sobic001G503600 Sobic002G389600 Sobic002G389600 Sobic003G212000--Sobic002G389600 Sobic002G170100 Sobic002G170100 Sobic003G212000--Sobic002G170100 Sobic009G189700--Sobic005G144000 Sobic009G189700--Sobic002G170100 Sobic009G189700--Sobic001G503600 Sobic009G189700--Sobic008G071300 Sobic006G272400 Sobic006G272400 Sobic009G189700--Sobic006G272400 Sobic001G039100 Sobic001G039100 Sobic009G189700--Sobic001G039100 Sobic009G242200 Sobic009G242200 Sobic009G189700--Sobic009G242200 Sobic003G441000 Sobic003G441000 Sobic009G189700--Sobic003G441000 Sobic005G042900 Sobic005G042900 Sobic009G189700--Sobic005G042900
Octagon: transcription factors


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