Gene annotation
Transcriptome id Sobic.007G212100.1
Synonym Sb07g027930
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
UniProt C5YIU3
Pfam PF07714 PF00069
Panther DB PTHR24351 PTHR24351:SF109
NCBI CDD KOG0610; Putative serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G51170 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os08g39460.1 : AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed
MaizeGDB (Corn) Zm00025a047437 , Zm00025a014200 , Zm00025a001612 , Zm00025a005069
Brachypodium KQJ98900 , PNT64827
Barley HORVU7Hr1G050240.1 , HORVU5Hr1G072930.2 , HORVU5Hr1G072930.3 , HORVU5Hr1G072930.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
2 Sobic.004G173700 SLL1 protein, putative, expressed -
3 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
4 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
5 Sobic.010G250300 ANTH/ENTH domain containing protein, putative, expressed -
6 Sobic.004G232700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@wound/stress protein, putative, expressed -
7 Sobic.003G139200 - -
8 Sobic.004G247500 "HD-zip transcription factor, ortholog of sihdz02 of foxtail millet (Setaria italica L.)"(PubMedID : 29862293)@caleosin related protein, putative, expressed K17991: peroxygenase
9 Sobic.004G165200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
11 Sobic.001G303900 CPuORF23 - conserved peptide uORF-containing transcript, expressed K01087: trehalose 6-phosphate phosphatase
12 Sobic.003G335300 E2F-related protein, putative, expressed -
13 Sobic.004G251600 leaf senescence related protein, putative, expressed -
14 Sobic.009G157800 transporter family protein, putative, expressed -
15 Sobic.007G127400 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
16 Sobic.010G216400 expressed protein -
17 Sobic.002G420600 nucleoside-triphosphatase, putative, expressed -
18 Sobic.001G350100 expressed high in San Chi San (an efficient nitrogen user)(PubMedID : 28697783)@RING-H2 finger protein ATL5H precursor, putative, expressed K10664: E3 ubiquitin-protein ligase ATL6/9/15/31/42/55
19 Sobic.003G202400 expressed protein -
20 Sobic.003G234500 CA(PubMedID : 19549309)@carbonic anhydrase(PubMedID : 26904072)@-(PubMedID : 26976818)@carbonic anhydrase, chloroplast precursor, putative, expressed K01673: cynT, carbonic anhydrase


Gene co-expression network
sample Sobic007G212100 Sobic007G212100 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic004G173700 Sobic004G173700 Sobic007G212100--Sobic004G173700 Sobic003G137600 Sobic003G137600 Sobic007G212100--Sobic003G137600 Sobic004G232500 Sobic004G232500 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic004G247500 Sobic004G247500 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic009G176400--Sobic007G212100 Sobic009G176400--Sobic004G173700 Sobic009G176400--Sobic004G247500 Sobic009G176400--Sobic003G137600 Sobic009G157800 Sobic009G157800 Sobic009G176400--Sobic009G157800 Sobic009G176400--Sobic004G232500 Sobic001G365700 Sobic001G365700 Sobic009G176400--Sobic001G365700 Sobic010G216400 Sobic010G216400 Sobic009G176400--Sobic010G216400 Sobic009G176400--Sobic004G232700 Sobic004G173700--Sobic003G137600 Sobic006G120900 Sobic006G120900 Sobic004G173700--Sobic006G120900 Sobic002G420600 Sobic002G420600 Sobic004G173700--Sobic002G420600 Sobic001G387200 Sobic001G387200 Sobic004G173700--Sobic001G387200 Sobic004G173700--Sobic001G365700 Sobic003G129900 Sobic003G129900 Sobic004G173700--Sobic003G129900 Sobic004G173700--Sobic007G212100 Sobic001G303900 Sobic001G303900 Sobic004G173700--Sobic001G303900 Sobic008G018300 Sobic008G018300 Sobic004G173700--Sobic008G018300 Sobic003G137600--Sobic004G173700 Sobic003G212000 Sobic003G212000 Sobic003G137600--Sobic003G212000 Sobic003G234500 Sobic003G234500 Sobic003G137600--Sobic003G234500 Sobic003G137600--Sobic006G120900 Sobic002G113200 Sobic002G113200 Sobic003G137600--Sobic002G113200 Sobic003G137600--Sobic001G365700 Sobic003G137600--Sobic007G212100 Sobic003G284100 Sobic003G284100 Sobic003G137600--Sobic003G284100 Sobic009G189700 Sobic009G189700 Sobic003G137600--Sobic009G189700 Sobic003G335300 Sobic003G335300 Sobic004G232500--Sobic003G335300 Sobic003G273000 Sobic003G273000 Sobic004G232500--Sobic003G273000 Sobic001G482800 Sobic001G482800 Sobic004G232500--Sobic001G482800 Sobic004G232500--Sobic007G212100 Sobic008G188400 Sobic008G188400 Sobic004G232500--Sobic008G188400 Sobic004G232500--Sobic010G216400 Sobic004G232500--Sobic001G365700 Sobic006G118400 Sobic006G118400 Sobic004G232500--Sobic006G118400 Sobic004G159400 Sobic004G159400 Sobic004G232500--Sobic004G159400 Sobic007G127500 Sobic007G127500 Sobic010G250300--Sobic007G127500 Sobic004G261800 Sobic004G261800 Sobic010G250300--Sobic004G261800 Sobic008G023300 Sobic008G023300 Sobic010G250300--Sobic008G023300 Sobic003G013700 Sobic003G013700 Sobic010G250300--Sobic003G013700 Sobic003G187700 Sobic003G187700 Sobic010G250300--Sobic003G187700 Sobic010G250300--Sobic001G303900 Sobic010G250300--Sobic007G212100 Sobic001G342101 Sobic001G342101 Sobic010G250300--Sobic001G342101 Sobic006G256000 Sobic006G256000 Sobic010G250300--Sobic006G256000 Sobic004G232700--Sobic007G212100 Sobic002G352200 Sobic002G352200 Sobic004G232700--Sobic002G352200 Sobic001G543400 Sobic001G543400 Sobic004G232700--Sobic001G543400 Sobic004G232700--Sobic009G176400 Sobic007G014700 Sobic007G014700 Sobic004G232700--Sobic007G014700 Sobic004G251600 Sobic004G251600 Sobic004G232700--Sobic004G251600 Sobic004G232700--Sobic004G173700 Sobic004G232700--Sobic004G261800 Sobic002G124900 Sobic002G124900 Sobic004G232700--Sobic002G124900 Sobic003G139200--Sobic004G173700 Sobic003G139200--Sobic003G137600 Sobic003G139200--Sobic006G120900 Sobic003G139200--Sobic007G212100 Sobic003G139200--Sobic002G113200 Sobic003G139200--Sobic004G247500 Sobic003G139200--Sobic001G303900 Sobic003G139200--Sobic003G212000 Sobic003G139200--Sobic009G189700 Sobic004G247500--Sobic001G303900 Sobic004G247500--Sobic009G157800 Sobic004G247500--Sobic009G189700 Sobic006G070564 Sobic006G070564 Sobic004G247500--Sobic006G070564 Sobic003G340000 Sobic003G340000 Sobic004G247500--Sobic003G340000 Sobic008G050900 Sobic008G050900 Sobic004G247500--Sobic008G050900 Sobic005G144000 Sobic005G144000 Sobic004G247500--Sobic005G144000 Sobic005G074300 Sobic005G074300 Sobic004G247500--Sobic005G074300 Sobic009G176600 Sobic009G176600 Sobic004G247500--Sobic009G176600 Sobic004G165200--Sobic004G173700 Sobic004G165200--Sobic007G212100 Sobic004G165200--Sobic003G137600 Sobic004G165200--Sobic006G120900 Sobic002G228900 Sobic002G228900 Sobic004G165200--Sobic002G228900 Sobic004G165200--Sobic003G139200 Sobic004G165200--Sobic001G303900 Sobic004G165200--Sobic002G420600 Sobic003G202400 Sobic003G202400 Sobic004G165200--Sobic003G202400
Octagon: transcription factors


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