Gene annotation
Transcriptome id Sobic.004G232500.1
Synonym Sb04g027610
Functional annotation dnaJ homolog subfamily C member 7, putative, expressed
UniProt A0A194YSC7
Pfam PF07719 PF13414
Panther DB PTHR22904 PTHR22904:SF358
NCBI CDD KOG0550; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09527; DnaJ homolog subfamily C member 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G65160 : tetratricopeptide repeat (TPR)-containing protein
RAP-DB (Rice) LOC_Os02g51730.1 : dnaJ homolog subfamily C member 7, putative, expressed
MaizeGDB (Corn) Zm00025a033165 , Zm00025a022139
Brachypodium KQK01857 , KQK01856
Barley HORVU6Hr1G074660.7 , HORVU6Hr1G074660.4 , HORVU6Hr1G074660.9 , HORVU6Hr1G074660.8 , HORVU6Hr1G074660.1 , HORVU6Hr1G074660.6 , HORVU6Hr1G074660.5 , HORVU6Hr1G074660.10 , HORVU6Hr1G074660.3 , HORVU6Hr1G074660.2
Wheat TraesCS6B02G330500 , TraesCS6A02G301400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G335300 E2F-related protein, putative, expressed -
2 Sobic.003G273000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
3 Sobic.001G482800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@ZIM domain containing protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.007G212100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@AGC_PVPK_like_CDK8.2 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
5 Sobic.008G188400 GNS1/SUR4 membrane family protein, putative, expressed -
6 Sobic.010G216400 expressed protein -
7 Sobic.001G365700 OsRhmbd13 - Putative Rhomboid homologue, expressed -
8 Sobic.006G118400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@gibberellin 20 oxidase 2, putative, expressed -
9 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
10 Sobic.008G006300 prenylated rab acceptor, putative, expressed -
11 Sobic.009G069600 NADP-ME(PubMedID : 19549309)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NADP-malic enzyme(PubMedID : 26904072)@NADP-dependent malic enzyme(PubMedID : 27016024)@NADP-dependent malic enzyme, chloroplast precursor, putative, expressed K00029: E1.1.1.40, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)
12 Sobic.009G176400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
13 Sobic.004G173700 SLL1 protein, putative, expressed -
14 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
15 Sobic.003G137600 CHIT10 - Chitinase family protein precursor, expressed -
16 Sobic.010G031000 expressed protein -
17 Sobic.004G247700 expressed protein -
18 Sobic.001G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
20 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7


Gene co-expression network
sample Sobic004G232500 Sobic004G232500 Sobic003G335300 Sobic003G335300 Sobic004G232500--Sobic003G335300 Sobic003G273000 Sobic003G273000 Sobic004G232500--Sobic003G273000 Sobic001G482800 Sobic001G482800 Sobic004G232500--Sobic001G482800 Sobic007G212100 Sobic007G212100 Sobic004G232500--Sobic007G212100 Sobic008G188400 Sobic008G188400 Sobic004G232500--Sobic008G188400 Sobic010G216400 Sobic010G216400 Sobic004G232500--Sobic010G216400 Sobic001G365700 Sobic001G365700 Sobic004G232500--Sobic001G365700 Sobic006G118400 Sobic006G118400 Sobic004G232500--Sobic006G118400 Sobic004G159400 Sobic004G159400 Sobic004G232500--Sobic004G159400 Sobic003G335300--Sobic001G365700 Sobic003G335300--Sobic001G482800 Sobic004G173700 Sobic004G173700 Sobic003G335300--Sobic004G173700 Sobic003G335300--Sobic004G232500 Sobic003G284100 Sobic003G284100 Sobic003G335300--Sobic003G284100 Sobic003G137600 Sobic003G137600 Sobic003G335300--Sobic003G137600 Sobic003G335300--Sobic006G118400 Sobic004G247700 Sobic004G247700 Sobic003G335300--Sobic004G247700 Sobic002G246800 Sobic002G246800 Sobic003G335300--Sobic002G246800 Sobic001G513300 Sobic001G513300 Sobic003G273000--Sobic001G513300 Sobic003G273000--Sobic004G232500 Sobic009G069600 Sobic009G069600 Sobic003G273000--Sobic009G069600 Sobic010G031000 Sobic010G031000 Sobic003G273000--Sobic010G031000 Sobic003G273000--Sobic004G159400 Sobic003G273000--Sobic006G118400 Sobic001G508466 Sobic001G508466 Sobic003G273000--Sobic001G508466 Sobic001G295100 Sobic001G295100 Sobic003G273000--Sobic001G295100 Sobic003G273000--Sobic010G216400 Sobic001G482800--Sobic004G247700 Sobic001G482800--Sobic003G335300 Sobic001G482800--Sobic001G365700 Sobic001G482800--Sobic004G232500 Sobic001G482800--Sobic008G188400 Sobic001G482800--Sobic003G137600 Sobic001G482800--Sobic006G118400 Sobic004G247500 Sobic004G247500 Sobic001G482800--Sobic004G247500 Sobic001G482800--Sobic003G284100 Sobic009G176400 Sobic009G176400 Sobic007G212100--Sobic009G176400 Sobic007G212100--Sobic004G173700 Sobic007G212100--Sobic003G137600 Sobic007G212100--Sobic004G232500 Sobic010G250300 Sobic010G250300 Sobic007G212100--Sobic010G250300 Sobic004G232700 Sobic004G232700 Sobic007G212100--Sobic004G232700 Sobic003G139200 Sobic003G139200 Sobic007G212100--Sobic003G139200 Sobic007G212100--Sobic004G247500 Sobic004G165200 Sobic004G165200 Sobic007G212100--Sobic004G165200 Sobic008G188400--Sobic004G247700 Sobic008G188400--Sobic001G482800 Sobic008G188400--Sobic004G232500 Sobic008G188400--Sobic001G365700 Sobic008G188400--Sobic003G335300 Sobic007G219500 Sobic007G219500 Sobic008G188400--Sobic007G219500 Sobic008G188400--Sobic004G173700 Sobic008G188400--Sobic003G284100 Sobic008G040400 Sobic008G040400 Sobic008G188400--Sobic008G040400 Sobic010G216400--Sobic001G365700 Sobic010G216400--Sobic009G069600 Sobic010G216400--Sobic004G232500 Sobic010G216400--Sobic010G031000 Sobic010G216400--Sobic003G273000 Sobic010G216400--Sobic009G176400 Sobic010G216400--Sobic003G335300 Sobic010G216400--Sobic004G173700 Sobic010G216400--Sobic001G482800 Sobic001G365700--Sobic003G335300 Sobic001G365700--Sobic004G173700 Sobic004G127000 Sobic004G127000 Sobic001G365700--Sobic004G127000 Sobic001G365700--Sobic003G137600 Sobic001G365700--Sobic001G482800 Sobic001G365700--Sobic010G216400 Sobic001G365700--Sobic003G284100 Sobic001G365700--Sobic004G232500 Sobic010G043250 Sobic010G043250 Sobic001G365700--Sobic010G043250 Sobic006G118400--Sobic003G273000 Sobic006G118400--Sobic004G232500 Sobic006G118400--Sobic003G335300 Sobic006G118400--Sobic001G482800 Sobic006G118400--Sobic004G159400 Sobic006G118400--Sobic001G365700 Sobic006G118400--Sobic010G216400 Sobic006G118400--Sobic010G031000 Sobic010G262300 Sobic010G262300 Sobic006G118400--Sobic010G262300 Sobic001G197000 Sobic001G197000 Sobic004G159400--Sobic001G197000 Sobic004G159400--Sobic001G508466 Sobic008G006300 Sobic008G006300 Sobic004G159400--Sobic008G006300 Sobic001G047800 Sobic001G047800 Sobic004G159400--Sobic001G047800 Sobic004G159400--Sobic003G273000 Sobic002G418400 Sobic002G418400 Sobic004G159400--Sobic002G418400 Sobic002G329900 Sobic002G329900 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G159400--Sobic004G232500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.