Gene annotation
Transcriptome id Sobic.008G006300.1
Synonym PRA1.B2, Sb08g000680
Functional annotation prenylated rab acceptor, putative, expressed
UniProt C5YQ40
Pfam PF03208
Panther DB PTHR19317 PTHR19317:SF9
NCBI CDD KOG3142; Prenylated rab acceptor 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G01640 : prenylated RAB acceptor 1.B5
RAP-DB (Rice) LOC_Os11g01610.1 : prenylated rab acceptor, putative, expressed
MaizeGDB (Corn) Zm00025a043961 , Zm00025a033283
Brachypodium -
Barley HORVU4Hr1G024530.8 , HORVU4Hr1G024530.1 , HORVU4Hr1G024530.2 , HORVU4Hr1G024530.3 , HORVU4Hr1G024530.4 , HORVU4Hr1G024530.5 , HORVU4Hr1G024530.6
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G047800 cytochrome b-c1 complex subunit 7, putative, expressed K00417: QCR7, ubiquinol-cytochrome c reductase subunit 7
2 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
3 Sobic.004G159400 hydrolase, NUDIX family, domain containing protein, expressed K07766: diphosphoinositol-polyphosphate diphosphatase
4 Sobic.002G329900 core histone H2A/H2B/H3/H4, putative, expressed K11251: histone H2A
5 Sobic.003G218400 cytochrome c oxidase subunit 5B, mitochondrial precursor, putative, expressed K02265: cytochrome c oxidase subunit 5b
6 Sobic.001G404800 CHCH domain containing protein, expressed K03952: NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8
7 Sobic.004G232500 dnaJ homolog subfamily C member 7, putative, expressed K09527: DnaJ homolog subfamily C member 7
8 Sobic.002G227300 expressed protein -
9 Sobic.004G055700 -(PubMedID : 26976818)@glycine cleavage system H protein, putative, expressed K02437: gcvH, glycine cleavage system H protein
10 Sobic.004G260200 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed -
11 Sobic.001G197000 dehydration response related protein, putative, expressed -
12 Sobic.001G508466 - -
13 Sobic.003G215700 ATP synthase epsilon chain, mitochondrial, putative, expressed K02135: ATPeF1E, ATP5E, F-type H+-transporting ATPase subunit epsilon
14 Sobic.003G209000 mitochondrial ATP synthase g subunit family protein, putative, expressed K02140: ATPeFG, ATP5L, F-type H+-transporting ATPase subunit g
15 Sobic.009G215300 fiber protein Fb11, putative, expressed -
16 Sobic.010G028200 GDP-mannose 4,6 dehydratase 2, putative, expressed K01711: gmd, GDPmannose 4,6-dehydratase
17 Sobic.001G110000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
18 Sobic.004G259200 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
19 Sobic.001G077000 similar to Cold acclimation protein COR413-PM1(PubMedID : 29862293)@cold acclimation protein WCOR413, putative, expressed -
20 Sobic.006G083500 SLL1 protein, putative, expressed -


Gene co-expression network
sample Sobic008G006300 Sobic008G006300 Sobic001G047800 Sobic001G047800 Sobic008G006300--Sobic001G047800 Sobic002G418400 Sobic002G418400 Sobic008G006300--Sobic002G418400 Sobic004G159400 Sobic004G159400 Sobic008G006300--Sobic004G159400 Sobic002G329900 Sobic002G329900 Sobic008G006300--Sobic002G329900 Sobic003G218400 Sobic003G218400 Sobic008G006300--Sobic003G218400 Sobic001G404800 Sobic001G404800 Sobic008G006300--Sobic001G404800 Sobic004G232500 Sobic004G232500 Sobic008G006300--Sobic004G232500 Sobic002G227300 Sobic002G227300 Sobic008G006300--Sobic002G227300 Sobic004G055700 Sobic004G055700 Sobic008G006300--Sobic004G055700 Sobic002G309700 Sobic002G309700 Sobic001G047800--Sobic002G309700 Sobic003G215700 Sobic003G215700 Sobic001G047800--Sobic003G215700 Sobic001G047800--Sobic002G418400 Sobic004G260200 Sobic004G260200 Sobic001G047800--Sobic004G260200 Sobic001G047800--Sobic001G404800 Sobic002G263100 Sobic002G263100 Sobic001G047800--Sobic002G263100 Sobic004G060500 Sobic004G060500 Sobic001G047800--Sobic004G060500 Sobic007G134900 Sobic007G134900 Sobic001G047800--Sobic007G134900 Sobic001G519000 Sobic001G519000 Sobic001G047800--Sobic001G519000 Sobic006G083500 Sobic006G083500 Sobic002G418400--Sobic006G083500 Sobic002G418400--Sobic003G215700 Sobic003G209000 Sobic003G209000 Sobic002G418400--Sobic003G209000 Sobic002G398901 Sobic002G398901 Sobic002G418400--Sobic002G398901 Sobic004G211833 Sobic004G211833 Sobic002G418400--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic002G418400--Sobic010G012500 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic002G418400--Sobic001G404800 Sobic001G197000 Sobic001G197000 Sobic004G159400--Sobic001G197000 Sobic001G508466 Sobic001G508466 Sobic004G159400--Sobic001G508466 Sobic004G159400--Sobic008G006300 Sobic004G159400--Sobic001G047800 Sobic003G273000 Sobic003G273000 Sobic004G159400--Sobic003G273000 Sobic004G159400--Sobic002G418400 Sobic004G159400--Sobic002G329900 Sobic004G259432 Sobic004G259432 Sobic004G159400--Sobic004G259432 Sobic004G159400--Sobic004G232500 Sobic002G329900--Sobic001G047800 Sobic001G110000 Sobic001G110000 Sobic002G329900--Sobic001G110000 Sobic002G329900--Sobic001G404800 Sobic002G329900--Sobic002G263100 Sobic002G329900--Sobic003G215700 Sobic002G329900--Sobic001G197000 Sobic002G329900--Sobic001G519000 Sobic002G329900--Sobic008G006300 Sobic002G348100 Sobic002G348100 Sobic002G329900--Sobic002G348100 Sobic003G218400--Sobic001G047800 Sobic003G218400--Sobic004G260200 Sobic003G218400--Sobic002G309700 Sobic003G218400--Sobic002G418400 Sobic003G218400--Sobic003G215700 Sobic003G218400--Sobic001G404800 Sobic007G013900 Sobic007G013900 Sobic003G218400--Sobic007G013900 Sobic004G170400 Sobic004G170400 Sobic003G218400--Sobic004G170400 Sobic001G074700 Sobic001G074700 Sobic003G218400--Sobic001G074700 Sobic001G404800--Sobic003G209000 Sobic001G404800--Sobic004G259200 Sobic001G404800--Sobic001G047800 Sobic001G404800--Sobic003G215700 Sobic001G404800--Sobic002G418400 Sobic002G356400 Sobic002G356400 Sobic001G404800--Sobic002G356400 Sobic001G404800--Sobic002G309700 Sobic001G404800--Sobic006G083500 Sobic001G404800--Sobic004G260200 Sobic003G335300 Sobic003G335300 Sobic004G232500--Sobic003G335300 Sobic004G232500--Sobic003G273000 Sobic001G482800 Sobic001G482800 Sobic004G232500--Sobic001G482800 Sobic007G212100 Sobic007G212100 Sobic004G232500--Sobic007G212100 Sobic008G188400 Sobic008G188400 Sobic004G232500--Sobic008G188400 Sobic010G216400 Sobic010G216400 Sobic004G232500--Sobic010G216400 Sobic001G365700 Sobic001G365700 Sobic004G232500--Sobic001G365700 Sobic006G118400 Sobic006G118400 Sobic004G232500--Sobic006G118400 Sobic004G232500--Sobic004G159400 Sobic006G249300 Sobic006G249300 Sobic002G227300--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic002G227300--Sobic001G139100 Sobic009G183400 Sobic009G183400 Sobic002G227300--Sobic009G183400 Sobic008G106700 Sobic008G106700 Sobic002G227300--Sobic008G106700 Sobic005G016700 Sobic005G016700 Sobic002G227300--Sobic005G016700 Sobic009G033300 Sobic009G033300 Sobic002G227300--Sobic009G033300 Sobic009G063900 Sobic009G063900 Sobic002G227300--Sobic009G063900 Sobic008G186100 Sobic008G186100 Sobic002G227300--Sobic008G186100 Sobic002G227300--Sobic002G418400 Sobic005G113300 Sobic005G113300 Sobic004G055700--Sobic005G113300 Sobic003G160700 Sobic003G160700 Sobic004G055700--Sobic003G160700 Sobic001G361600 Sobic001G361600 Sobic004G055700--Sobic001G361600 Sobic009G188000 Sobic009G188000 Sobic004G055700--Sobic009G188000 Sobic002G090300 Sobic002G090300 Sobic004G055700--Sobic002G090300 Sobic004G055700--Sobic002G418400 Sobic010G028200 Sobic010G028200 Sobic004G055700--Sobic010G028200 Sobic004G042000 Sobic004G042000 Sobic004G055700--Sobic004G042000 Sobic004G220000 Sobic004G220000 Sobic004G055700--Sobic004G220000
Octagon: transcription factors


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