Gene annotation
Transcriptome id Sobic.002G227300.1
Synonym Sb02g026760
Functional annotation expressed protein
UniProt C5X2D0
Pfam -
Panther DB PTHR36324 PTHR36324:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G47410 : -
RAP-DB (Rice) LOC_Os09g28600.1 : expressed protein
MaizeGDB (Corn) Zm00025a014081 , Zm00025a047284
Brachypodium KQJ90532 , KQJ90531
Barley HORVU5Hr1G068780.2 , HORVU5Hr1G068780.3 , HORVU5Hr1G068780.1 , HORVU5Hr1G106510.1 , HORVU0Hr1G013120.1 , HORVU0Hr1G013120.2
Wheat TraesCS5D02G245800 , TraesCS5A02G238800 , TraesCS5B02G239100 , TraesCS5D02G247300 , TraesCS5A02G240800 , TraesCS5B02G237400 , TraesCS5D02G247500 , TraesCS5A02G241000
Populus -


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cDNA sequences
Sobic.002G227300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G249300 expressed protein -
2 Sobic.001G139100 expressed protein -
3 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
4 Sobic.008G106700 isoflavone reductase, putative, expressed -
5 Sobic.005G016700 DUF567 domain containing protein, putative, expressed -
6 Sobic.009G033300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.009G063900 expressed protein -
8 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.002G418400 ubiquinol-cytochrome c reductase complex 6.7 kDa protein, putative, expressed -
10 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
11 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
12 Sobic.006G046900 expressed protein -
13 Sobic.003G062600 limonoid UDP-glucosyltransferase, putative, expressed -
14 Sobic.001G169500 - -
15 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
16 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
18 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
20 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78


Gene co-expression network
sample Sobic002G227300 Sobic002G227300 Sobic006G249300 Sobic006G249300 Sobic002G227300--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic002G227300--Sobic001G139100 Sobic009G183400 Sobic009G183400 Sobic002G227300--Sobic009G183400 Sobic008G106700 Sobic008G106700 Sobic002G227300--Sobic008G106700 Sobic005G016700 Sobic005G016700 Sobic002G227300--Sobic005G016700 Sobic009G033300 Sobic009G033300 Sobic002G227300--Sobic009G033300 Sobic009G063900 Sobic009G063900 Sobic002G227300--Sobic009G063900 Sobic008G186100 Sobic008G186100 Sobic002G227300--Sobic008G186100 Sobic002G418400 Sobic002G418400 Sobic002G227300--Sobic002G418400 Sobic006G249300--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic006G249300--Sobic001G169500 Sobic004G100700 Sobic004G100700 Sobic006G249300--Sobic004G100700 Sobic006G249300--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic006G249300--Sobic005G011300 Sobic003G086600 Sobic003G086600 Sobic006G249300--Sobic003G086600 Sobic010G259600 Sobic010G259600 Sobic006G249300--Sobic010G259600 Sobic003G084400 Sobic003G084400 Sobic006G249300--Sobic003G084400 Sobic006G249300--Sobic009G183400 Sobic001G139100--Sobic006G249300 Sobic009G229000 Sobic009G229000 Sobic001G139100--Sobic009G229000 Sobic001G139100--Sobic008G186100 Sobic001G139100--Sobic001G169500 Sobic001G139100--Sobic010G259600 Sobic003G319500 Sobic003G319500 Sobic001G139100--Sobic003G319500 Sobic004G046200 Sobic004G046200 Sobic001G139100--Sobic004G046200 Sobic001G389000 Sobic001G389000 Sobic001G139100--Sobic001G389000 Sobic007G087200 Sobic007G087200 Sobic001G139100--Sobic007G087200 Sobic001G476500 Sobic001G476500 Sobic009G183400--Sobic001G476500 Sobic001G119400 Sobic001G119400 Sobic009G183400--Sobic001G119400 Sobic006G092500 Sobic006G092500 Sobic009G183400--Sobic006G092500 Sobic001G038900 Sobic001G038900 Sobic009G183400--Sobic001G038900 Sobic001G097600 Sobic001G097600 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic009G183400--Sobic004G100700 Sobic001G140900 Sobic001G140900 Sobic009G183400--Sobic001G140900 Sobic008G106700--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic008G106700--Sobic001G500000 Sobic006G044100 Sobic006G044100 Sobic008G106700--Sobic006G044100 Sobic008G106700--Sobic003G084400 Sobic003G079400 Sobic003G079400 Sobic008G106700--Sobic003G079400 Sobic008G106700--Sobic009G183400 Sobic009G179900 Sobic009G179900 Sobic008G106700--Sobic009G179900 Sobic008G106700--Sobic001G139100 Sobic006G199800 Sobic006G199800 Sobic008G106700--Sobic006G199800 Sobic005G016700--Sobic009G063900 Sobic002G361100 Sobic002G361100 Sobic005G016700--Sobic002G361100 Sobic005G016700--Sobic009G033300 Sobic005G016700--Sobic002G227300 Sobic002G287100 Sobic002G287100 Sobic005G016700--Sobic002G287100 Sobic005G016700--Sobic009G061200 Sobic005G016700--Sobic009G183400 Sobic003G033900 Sobic003G033900 Sobic005G016700--Sobic003G033900 Sobic005G016700--Sobic001G476500 Sobic009G033300--Sobic002G287100 Sobic009G033300--Sobic006G249300 Sobic009G033300--Sobic001G500000 Sobic009G033300--Sobic008G186100 Sobic002G250000 Sobic002G250000 Sobic009G033300--Sobic002G250000 Sobic009G033300--Sobic004G100700 Sobic009G033300--Sobic001G476500 Sobic009G170700 Sobic009G170700 Sobic009G033300--Sobic009G170700 Sobic009G033300--Sobic001G139100 Sobic006G275200 Sobic006G275200 Sobic009G063900--Sobic006G275200 Sobic009G063900--Sobic001G097600 Sobic002G393000 Sobic002G393000 Sobic009G063900--Sobic002G393000 Sobic009G063900--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic009G063900--Sobic004G280200 Sobic004G205100 Sobic004G205100 Sobic009G063900--Sobic004G205100 Sobic009G063900--Sobic009G183400 Sobic001G405500 Sobic001G405500 Sobic009G063900--Sobic001G405500 Sobic001G309600 Sobic001G309600 Sobic009G063900--Sobic001G309600 Sobic008G186100--Sobic005G011300 Sobic008G186100--Sobic002G287100 Sobic008G186100--Sobic004G100700 Sobic008G186100--Sobic001G169500 Sobic010G029700 Sobic010G029700 Sobic008G186100--Sobic010G029700 Sobic008G186100--Sobic006G249300 Sobic008G186100--Sobic001G139100 Sobic008G186100--Sobic002G250000 Sobic008G186100--Sobic006G092500 Sobic006G083500 Sobic006G083500 Sobic002G418400--Sobic006G083500 Sobic003G215700 Sobic003G215700 Sobic002G418400--Sobic003G215700 Sobic003G209000 Sobic003G209000 Sobic002G418400--Sobic003G209000 Sobic002G398901 Sobic002G398901 Sobic002G418400--Sobic002G398901 Sobic004G211833 Sobic004G211833 Sobic002G418400--Sobic004G211833 Sobic010G012500 Sobic010G012500 Sobic002G418400--Sobic010G012500 Sobic001G047800 Sobic001G047800 Sobic002G418400--Sobic001G047800 Sobic004G259200 Sobic004G259200 Sobic002G418400--Sobic004G259200 Sobic001G404800 Sobic001G404800 Sobic002G418400--Sobic001G404800
Octagon: transcription factors


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