Gene annotation
Transcriptome id Sobic.005G016700.1
Synonym Sb05g001420
Functional annotation DUF567 domain containing protein, putative, expressed
UniProt C5Y3K3
Pfam PF04525
Panther DB PTHR31087 PTHR31087:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G80120 : Protein of unknown function (DUF567)
RAP-DB (Rice) LOC_Os12g02760.1 : DUF567 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033327 , Zm00025a029003 , Zm00025a013169
Brachypodium KQJ92513
Barley -
Wheat TraesCS5A02G144800 , TraesCS5D02G147500 , TraesCS5D02G147400 , TraesCS5B02G143700 , TraesCS5B02G143600 , TraesCS5A02G145000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G063900 expressed protein -
2 Sobic.002G361100 similar to Glutathione transferase(PubMedID : 29862293)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.009G033300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.002G227300 expressed protein -
5 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
6 Sobic.009G061200 universal stress protein domain containing protein, putative, expressed -
7 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
8 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
9 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
10 Sobic.004G146000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
11 Sobic.009G032800 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.006G127900 helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
14 Sobic.002G104900 B12D protein, putative, expressed -
15 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
16 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
17 Sobic.004G205100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K00134: GAPDH, glyceraldehyde 3-phosphate dehydrogenase
18 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
19 Sobic.001G108200 expressed protein -
20 Sobic.001G319600 Relative abundance under control condition and upregulated in cold susceptible sorghum under cold stress(PubMedID : 26645959)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic005G016700 Sobic005G016700 Sobic009G063900 Sobic009G063900 Sobic005G016700--Sobic009G063900 Sobic002G361100 Sobic002G361100 Sobic005G016700--Sobic002G361100 Sobic009G033300 Sobic009G033300 Sobic005G016700--Sobic009G033300 Sobic002G227300 Sobic002G227300 Sobic005G016700--Sobic002G227300 Sobic002G287100 Sobic002G287100 Sobic005G016700--Sobic002G287100 Sobic009G061200 Sobic009G061200 Sobic005G016700--Sobic009G061200 Sobic009G183400 Sobic009G183400 Sobic005G016700--Sobic009G183400 Sobic003G033900 Sobic003G033900 Sobic005G016700--Sobic003G033900 Sobic001G476500 Sobic001G476500 Sobic005G016700--Sobic001G476500 Sobic006G275200 Sobic006G275200 Sobic009G063900--Sobic006G275200 Sobic001G097600 Sobic001G097600 Sobic009G063900--Sobic001G097600 Sobic002G393000 Sobic002G393000 Sobic009G063900--Sobic002G393000 Sobic003G086600 Sobic003G086600 Sobic009G063900--Sobic003G086600 Sobic004G280200 Sobic004G280200 Sobic009G063900--Sobic004G280200 Sobic004G205100 Sobic004G205100 Sobic009G063900--Sobic004G205100 Sobic009G063900--Sobic009G183400 Sobic001G405500 Sobic001G405500 Sobic009G063900--Sobic001G405500 Sobic001G309600 Sobic001G309600 Sobic009G063900--Sobic001G309600 Sobic002G361100--Sobic009G061200 Sobic001G319600 Sobic001G319600 Sobic002G361100--Sobic001G319600 Sobic001G387900 Sobic001G387900 Sobic002G361100--Sobic001G387900 Sobic003G078100 Sobic003G078100 Sobic002G361100--Sobic003G078100 Sobic009G224100 Sobic009G224100 Sobic002G361100--Sobic009G224100 Sobic004G037000 Sobic004G037000 Sobic002G361100--Sobic004G037000 Sobic010G084600 Sobic010G084600 Sobic002G361100--Sobic010G084600 Sobic001G108200 Sobic001G108200 Sobic002G361100--Sobic001G108200 Sobic004G216600 Sobic004G216600 Sobic002G361100--Sobic004G216600 Sobic009G033300--Sobic002G287100 Sobic006G249300 Sobic006G249300 Sobic009G033300--Sobic006G249300 Sobic001G500000 Sobic001G500000 Sobic009G033300--Sobic001G500000 Sobic008G186100 Sobic008G186100 Sobic009G033300--Sobic008G186100 Sobic002G250000 Sobic002G250000 Sobic009G033300--Sobic002G250000 Sobic004G100700 Sobic004G100700 Sobic009G033300--Sobic004G100700 Sobic009G033300--Sobic001G476500 Sobic009G170700 Sobic009G170700 Sobic009G033300--Sobic009G170700 Sobic001G139100 Sobic001G139100 Sobic009G033300--Sobic001G139100 Sobic002G227300--Sobic006G249300 Sobic002G227300--Sobic001G139100 Sobic002G227300--Sobic009G183400 Sobic008G106700 Sobic008G106700 Sobic002G227300--Sobic008G106700 Sobic002G227300--Sobic005G016700 Sobic002G227300--Sobic009G033300 Sobic002G227300--Sobic009G063900 Sobic002G227300--Sobic008G186100 Sobic002G418400 Sobic002G418400 Sobic002G227300--Sobic002G418400 Sobic002G287100--Sobic001G500000 Sobic002G287100--Sobic008G186100 Sobic002G287100--Sobic001G476500 Sobic009G240600 Sobic009G240600 Sobic002G287100--Sobic009G240600 Sobic002G287100--Sobic009G033300 Sobic001G481400 Sobic001G481400 Sobic002G287100--Sobic001G481400 Sobic002G287100--Sobic009G183400 Sobic010G029700 Sobic010G029700 Sobic002G287100--Sobic010G029700 Sobic006G092500 Sobic006G092500 Sobic002G287100--Sobic006G092500 Sobic009G061200--Sobic004G216600 Sobic009G061200--Sobic009G183400 Sobic009G061200--Sobic001G476500 Sobic001G119400 Sobic001G119400 Sobic009G061200--Sobic001G119400 Sobic001G423800 Sobic001G423800 Sobic009G061200--Sobic001G423800 Sobic009G061200--Sobic002G361100 Sobic002G188900 Sobic002G188900 Sobic009G061200--Sobic002G188900 Sobic009G008900 Sobic009G008900 Sobic009G061200--Sobic009G008900 Sobic009G061200--Sobic004G100700 Sobic009G183400--Sobic001G476500 Sobic009G183400--Sobic001G119400 Sobic009G183400--Sobic006G092500 Sobic001G038900 Sobic001G038900 Sobic009G183400--Sobic001G038900 Sobic009G183400--Sobic001G097600 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic009G183400--Sobic004G100700 Sobic001G140900 Sobic001G140900 Sobic009G183400--Sobic001G140900 Sobic003G033900--Sobic002G188900 Sobic003G033900--Sobic001G108200 Sobic003G033900--Sobic004G100700 Sobic003G393900 Sobic003G393900 Sobic003G033900--Sobic003G393900 Sobic003G033900--Sobic001G476500 Sobic004G304625 Sobic004G304625 Sobic003G033900--Sobic004G304625 Sobic005G011300 Sobic005G011300 Sobic003G033900--Sobic005G011300 Sobic004G141200 Sobic004G141200 Sobic003G033900--Sobic004G141200 Sobic004G229800 Sobic004G229800 Sobic003G033900--Sobic004G229800 Sobic001G476500--Sobic006G092500 Sobic001G476500--Sobic009G183400 Sobic003G417800 Sobic003G417800 Sobic001G476500--Sobic003G417800 Sobic001G476500--Sobic002G287100 Sobic001G476500--Sobic004G100700 Sobic001G476500--Sobic009G240600 Sobic001G476500--Sobic001G119400 Sobic001G476500--Sobic003G033900 Sobic001G476500--Sobic001G500000
Octagon: transcription factors


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