Gene annotation
Transcriptome id Sobic.006G249300.1
Synonym Sb06g031450
Functional annotation expressed protein
UniProt C5Y9K3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g56390.1 : expressed protein
MaizeGDB (Corn) Zm00025a009455 , Zm00025a057259
Brachypodium -
Barley HORVU2Hr1G111280.1 , HORVU2Hr1G111290.1 , HORVU2Hr1G111290.2 , HORVU2Hr1G111290.3
Wheat TraesCS2B02G528400 , TraesCS2A02G500500 , TraesCS2D02G500700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G139100 expressed protein -
2 Sobic.001G169500 - -
3 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
4 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
5 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
7 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
8 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
9 Sobic.009G183400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
10 Sobic.006G092500 expressed protein -
11 Sobic.001G309600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type, domain containing protein, expressed -
12 Sobic.006G046900 expressed protein -
13 Sobic.009G229000 expressed protein -
14 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
15 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
16 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
17 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
18 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
19 Sobic.009G033300 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.007G015600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic006G249300 Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic006G249300--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic006G249300--Sobic001G169500 Sobic004G100700 Sobic004G100700 Sobic006G249300--Sobic004G100700 Sobic008G186100 Sobic008G186100 Sobic006G249300--Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic006G249300--Sobic005G011300 Sobic003G086600 Sobic003G086600 Sobic006G249300--Sobic003G086600 Sobic010G259600 Sobic010G259600 Sobic006G249300--Sobic010G259600 Sobic003G084400 Sobic003G084400 Sobic006G249300--Sobic003G084400 Sobic009G183400 Sobic009G183400 Sobic006G249300--Sobic009G183400 Sobic001G139100--Sobic006G249300 Sobic009G229000 Sobic009G229000 Sobic001G139100--Sobic009G229000 Sobic001G139100--Sobic008G186100 Sobic001G139100--Sobic001G169500 Sobic001G139100--Sobic010G259600 Sobic003G319500 Sobic003G319500 Sobic001G139100--Sobic003G319500 Sobic004G046200 Sobic004G046200 Sobic001G139100--Sobic004G046200 Sobic001G389000 Sobic001G389000 Sobic001G139100--Sobic001G389000 Sobic007G087200 Sobic007G087200 Sobic001G139100--Sobic007G087200 Sobic001G169500--Sobic005G011300 Sobic001G169500--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic001G169500--Sobic005G099000 Sobic003G382800 Sobic003G382800 Sobic001G169500--Sobic003G382800 Sobic004G336500 Sobic004G336500 Sobic001G169500--Sobic004G336500 Sobic003G432700 Sobic003G432700 Sobic001G169500--Sobic003G432700 Sobic001G169500--Sobic006G249300 Sobic005G107900 Sobic005G107900 Sobic001G169500--Sobic005G107900 Sobic002G068600 Sobic002G068600 Sobic001G169500--Sobic002G068600 Sobic004G100700--Sobic005G011300 Sobic002G188900 Sobic002G188900 Sobic004G100700--Sobic002G188900 Sobic001G140900 Sobic001G140900 Sobic004G100700--Sobic001G140900 Sobic001G108200 Sobic001G108200 Sobic004G100700--Sobic001G108200 Sobic004G100700--Sobic001G169500 Sobic004G141200 Sobic004G141200 Sobic004G100700--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic004G100700--Sobic003G393900 Sobic004G301000 Sobic004G301000 Sobic004G100700--Sobic004G301000 Sobic001G367600 Sobic001G367600 Sobic004G100700--Sobic001G367600 Sobic008G186100--Sobic005G011300 Sobic002G287100 Sobic002G287100 Sobic008G186100--Sobic002G287100 Sobic008G186100--Sobic004G100700 Sobic008G186100--Sobic001G169500 Sobic010G029700 Sobic010G029700 Sobic008G186100--Sobic010G029700 Sobic008G186100--Sobic006G249300 Sobic008G186100--Sobic001G139100 Sobic002G250000 Sobic002G250000 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic005G011300--Sobic001G140900 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic003G086600--Sobic002G068600 Sobic003G394400 Sobic003G394400 Sobic003G086600--Sobic003G394400 Sobic001G405500 Sobic001G405500 Sobic003G086600--Sobic001G405500 Sobic003G086600--Sobic001G108200 Sobic004G166200 Sobic004G166200 Sobic003G086600--Sobic004G166200 Sobic003G086600--Sobic003G382800 Sobic003G355100 Sobic003G355100 Sobic003G086600--Sobic003G355100 Sobic001G397200 Sobic001G397200 Sobic003G086600--Sobic001G397200 Sobic007G026600 Sobic007G026600 Sobic003G086600--Sobic007G026600 Sobic009G159400 Sobic009G159400 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic009G234100 Sobic009G234100 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic001G435000 Sobic001G435000 Sobic010G259600--Sobic001G435000 Sobic003G255200 Sobic003G255200 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800 Sobic003G084400--Sobic005G011300 Sobic001G500000 Sobic001G500000 Sobic003G084400--Sobic001G500000 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic001G304100 Sobic001G304100 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic003G084400--Sobic005G107900 Sobic003G084400--Sobic004G100700 Sobic001G313600 Sobic001G313600 Sobic003G084400--Sobic001G313600 Sobic001G476500 Sobic001G476500 Sobic009G183400--Sobic001G476500 Sobic001G119400 Sobic001G119400 Sobic009G183400--Sobic001G119400 Sobic009G183400--Sobic006G092500 Sobic001G038900 Sobic001G038900 Sobic009G183400--Sobic001G038900 Sobic001G097600 Sobic001G097600 Sobic009G183400--Sobic001G097600 Sobic009G061200 Sobic009G061200 Sobic009G183400--Sobic009G061200 Sobic002G414600 Sobic002G414600 Sobic009G183400--Sobic002G414600 Sobic009G183400--Sobic004G100700 Sobic009G183400--Sobic001G140900
Octagon: transcription factors


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